| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_2046 |
|---|
| Symbol | |
|---|
| ID | 3691213 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 2213393 |
|---|
| End bp | 2214337 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 637728502 |
|---|
| Product | putative fimbriae-related membrane protein |
|---|
| Protein accession | YP_333441 |
|---|
| Protein GI | 76810064 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2064] Flp pilus assembly protein TadC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0336894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCGG CCGCGCTGTC GATCACCGTG CTGCTCGCGC TCGTCGCCGT CGCGGCGCTG
GCGTGGCTGC TCACCCGCGA CGTCGCGGTG CGCCGGCGCG TCGCGCAGCG CGCGCGCGCG
AGCGCCGCGC GCGCGGCGGC CGTCTACGCG CCGGTGGACG ACGGCGCGCG CAGCGTGCCG
CGGCGCGTCG CGCAGCGCGT GGCGTCGCTC GGCGAGCGGG TGCCCGTCGT CGACGCGACG
CAGCGGATGA AGCTTGCCGC GCGGCTCGCG AGCGCGGGCT TTCGCGAGCA TCGCGCGGTG
TCGGTGATGG CGGGGCTCAA GCTCGTCGTC GGCGCGTGCG CGGGGCTCGC CGCGCTCGCG
CTCGGCGCGC ACGTGCCGCG CGTGGGCGAC TACGTGGTGC TGCGCGTGCT GATGATGGCG
GGCGCGTTCG TGATCGGCAT GATGCTGCCC GAGCATGCGC TCGGCTTCGT GCTCGCGCGG
CGCCAGAAGA CGATCGCCGC GTACCTGCCC GACGCGCTCG ACCTGCTCGT CATCTGCACG
AACGCGGGCA ACAGCCTCGC GGTCGCGATC CGGCGCGTCG CGTCCGAGCT GAAGACGATC
TGCCCGCCGC TCGCCGACGA ATTCTCCGTG TGCGCGGACG AACTGCAGAT CGGCGGCGAC
GCCGCGTTCG CGCTCAACGC GATGGCCGCG CGCATCGGCC TGCCGTCGAT GCGCGCGCTC
GTGACGACGC TCGTCCAGTC GCAGCAATAC GGCACGCCGA TCACGCAGTC GCTGCGGATG
CTCTCGCGCA CCGAGCGCGC GATGCAGATG ATCGCGCTCG AGGAAAAGGC GGCGAAGCTC
GCGCCGAAGA TGACGCTGCC GATGATGCTG TTCGTGATGC CGACCGTCGC GTTGATCGCG
GCGGGGCCGG CGGTGATTCG ACTGATAGCG GTGTTCCACA AATGA
|
|---|
| Protein sequence | MTPAALSITV LLALVAVAAL AWLLTRDVAV RRRVAQRARA SAARAAAVYA PVDDGARSVP
RRVAQRVASL GERVPVVDAT QRMKLAARLA SAGFREHRAV SVMAGLKLVV GACAGLAALA
LGAHVPRVGD YVVLRVLMMA GAFVIGMMLP EHALGFVLAR RQKTIAAYLP DALDLLVICT
NAGNSLAVAI RRVASELKTI CPPLADEFSV CADELQIGGD AAFALNAMAA RIGLPSMRAL
VTTLVQSQQY GTPITQSLRM LSRTERAMQM IALEEKAAKL APKMTLPMML FVMPTVALIA
AGPAVIRLIA VFHK
|
|---|
| |