| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1989 |
|---|
| Symbol | ssuD |
|---|
| ID | 3688750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 2161573 |
|---|
| End bp | 2163084 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637728445 |
|---|
| Product | alkanesulfonate monooxygenase |
|---|
| Protein accession | YP_333385 |
|---|
| Protein GI | 76810366 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | [TIGR03565] alkanesulfonate monooxygenase, FMNH(2)-dependent |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.17879 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCGC GGCGCCATGC GGCGCGCGCC GGGTTGTCAG GGACTTGGTG CGACATTATA
GGGGGCCCGT GCGCGCATAT TCGCTGCAGC GGCGCGCTAT GCACGAAAGC GGAAAACCTA
AGCTCAAAAA AATCGTTCCT ATACGAAATC GCGCTCCCTA GACTGATTCC CCGAGAGACG
GCCATGCCGC CCCCCCCGCG CGGCGCGCGG CGGCGCGTGC GCGTTCCCGC GATTTCCGCG
GCACGCGTTT CATCCCGCGC ATCGGCGAGC GGCGCGCGCA TCGTGGCGCA TCGTGGCGCG
GCCCCGCATC GCCGTCGCCC ATTTCTAGCA CGATCAGTCA GGCAGGAGTT TCGCATGAAT
GTGTTCTGGT TCATCCCCAC GCACGGCGAC AGCCGCTATC TCGGCACGGC CGAGGGCGCG
CGCGCCGCGG ACTACGACTA CTTCCGGCAG GTTGCCGTCG CGGCCGACAC GCTCGGCTAC
GACGGCGTGC TGCTGCCGAC GGGGCGTTCG TGCGAGGATG CGTGGGTGGT CGCCTCGAGC
CTGATTCCGG CGACGAAGCG CCTGAAGTTC CTGGTCGCGA TCCGCCCGGG CCTGTCGTCG
CCGGGGCTCT CCGCGCGGAT GGCGTCGACG TTCGACCGGC TCTCCGATGG GCGTTTGCTG
ATCAACGTCG TGACGGGCGG CGATTCGGCC GAGCTAGAAG GCGATGGCCT CTTCGCCGAT
CACGACACGC GCTACGCGAT CACCGACGAC TTCCTGCACA TCTGGCGCGG GCTGCTCGCC
GAATCGCACG AGAACGGCGG CATCGATTTC GACGGCGAGC ACCTGAGCGC GAAGGGCGGC
AAGCTGCTGT ACCCGCCCGT TCAGCGCCCG CATCCGCCGC TCTGGTTCGG CGGCTCGTCG
CCCGCCGCGC ACGCGATCGC GGCCGACCAC ATCGATACGT ACCTGAGCTG GGGCGAGCCG
CCCGCGGCGG TCGAGAAGAA GATCGCCGAC ATCCGCGCGC GCGCGGCCGC GCGCGGCCGC
GAGATCAAGT TCGGGATTCG CCTGCACGTG ATCGTGCGCG AGACGCAGGA AGAGGCATGG
CGCGACGCCG ATCGCCTCAT CAGCCGGCTC GACGACGATA CGATCGCGCG CGCGCAACAG
GCGTTCGCGA AGATGGATTC CGAAGGGCAG CGCCGGATGG CCGCGCTGCA CGGCGGCAAG
CGCGGCTCGC GCCAGGAGCT CGAGATCTAT CCGAACCTGT GGGCGGGCGT CGGGCTCGTG
CGCGGCGGCG CGGGGACGGC GCTCGTCGGG AATCCCGAGC AAATCGCCGC GCGGATGCGC
GAGTACGCGG CGCTCGGCAT CGAGACGTTC ATCCTGTCCG GCTATCCGCA TCTCGAGGAA
TCGTACCGCT TCGCCGAGCT CGTGTTTCCG CTCGTCAAGG GCGGCGGCAA CACGCGCCGC
GCGGGGCCGC TGTCGGGGCC GTTCGGCGAA GTCGTCGGCA ACCAGTATCT GCCGAAGGCG
AGCCAGAGCT GA
|
|---|
| Protein sequence | MKARRHAARA GLSGTWCDII GGPCAHIRCS GALCTKAENL SSKKSFLYEI ALPRLIPRET
AMPPPPRGAR RRVRVPAISA ARVSSRASAS GARIVAHRGA APHRRRPFLA RSVRQEFRMN
VFWFIPTHGD SRYLGTAEGA RAADYDYFRQ VAVAADTLGY DGVLLPTGRS CEDAWVVASS
LIPATKRLKF LVAIRPGLSS PGLSARMAST FDRLSDGRLL INVVTGGDSA ELEGDGLFAD
HDTRYAITDD FLHIWRGLLA ESHENGGIDF DGEHLSAKGG KLLYPPVQRP HPPLWFGGSS
PAAHAIAADH IDTYLSWGEP PAAVEKKIAD IRARAAARGR EIKFGIRLHV IVRETQEEAW
RDADRLISRL DDDTIARAQQ AFAKMDSEGQ RRMAALHGGK RGSRQELEIY PNLWAGVGLV
RGGAGTALVG NPEQIAARMR EYAALGIETF ILSGYPHLEE SYRFAELVFP LVKGGGNTRR
AGPLSGPFGE VVGNQYLPKA SQS
|
|---|
| |