Gene BURPS1710b_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1959 
Symbol 
ID3689128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2131931 
End bp2133157 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content67% 
IMG OID637728415 
Productmajor facilitator family transporter 
Protein accessionYP_333358 
Protein GI76809112 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00891] putative sialic acid transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00107928 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATGA GCTGGACCCG GGAGCAACGC AACGTCACGA TCGCCGCCTA TCTCGGCTGG 
ACGCTCGACG CGTTCGACTT CTTCCTGATG GTCTTCGTGC TGAAGGACAT CGCCGCCGAA
TTCAACACGA AGATTCCCGC CGTCGCGTTC GCGATCACGC TGACGCTCGC CGCGCGCCCG
ATCGGCGCGC TGATCTTCGG CCGCCTCGCC GATCACTTCG GCCGCCGGCC GACGCTGATG
ATCAACATCG CGTGCTACTC GCTGCTCGAG CTCGCGTCCG GCTTCGCGCC GAGCCTCGCC
GCGCTGCTCG TGCTGCGCAC GCTGTTCGGC GTCGCGATGG GCGGCGAATG GGGCGTCGGC
TCCGCGCTGA CGATGGAGAC GGTTCCGCCG CGCGCGCGCG GCGCGGTGTC GGGCCTGCTG
CAGGCGGGCT ATCCGAGCGG CTACCTGCTC GCGTCGGTCG TCTTCGGCCT GCTCTACCCG
TACATCGGCT GGCGCGGCAT GTTCATGATC GGCGTGCTGC CCGCGCTGCT CGTGCTGTAC
GTGCGCGCGA AAGTGCCCGA ATCGCCCGCG TGGAAGCAGA TGGAAAAGCG CGCGCGGCCG
GGCCTCGTCG CCACGCTCAA GCAGAACTGG AAACTGTCGA TCTATGCAGT CGTCCTGATG
ACCGCGTTCA ACTTCTTCTC GCACGGCACG CAGGATCTCT ACCCGACTTT CCTGCGCGAG
CAGCATCACT TCGATCCGCA TACGGTGTCG TGGATCACGA TCGTGCTGAA CATCGGCGCG
ATCGTGGGCG GCCTCACGTT CGGCTGGTTG TCCGAACGCA TCGGCCGGCG CCGCGCGATC
TTCATCGCCG CGATGATCGC GCTGCCCGTG CTGCCGCTGT GGGCGTTCTC GACCGGCGCG
CTCGCGCTCG CCGCGGGCGC GTTCCTGATG CAGATCTCGG TGCAGGGCGC GTGGGGCGTG
ATCCCCGTGC ACCTGAACGA GATTTCACCG GACGAGATTC GCGCGACGTT CCCCGGCTTC
GTCTATCAGC TCGGCAACCT GCTCGCGTCG GGCAACGCGA CGCTGCAGGC GCAGTTCGCG
GTCGATCACG GCAACAACTA CGGCATGGCG CTCGCGACGG TCGCGGGCAT CGTCGCCGTC
GTCATCTGCG TTTTAATTGT GTTCAGCCGC GAACGACGCG GAATCGACAT GACGCAGACG
GCCGCGATGA GCCCGACCAG CGGATGA
 
Protein sequence
MAMSWTREQR NVTIAAYLGW TLDAFDFFLM VFVLKDIAAE FNTKIPAVAF AITLTLAARP 
IGALIFGRLA DHFGRRPTLM INIACYSLLE LASGFAPSLA ALLVLRTLFG VAMGGEWGVG
SALTMETVPP RARGAVSGLL QAGYPSGYLL ASVVFGLLYP YIGWRGMFMI GVLPALLVLY
VRAKVPESPA WKQMEKRARP GLVATLKQNW KLSIYAVVLM TAFNFFSHGT QDLYPTFLRE
QHHFDPHTVS WITIVLNIGA IVGGLTFGWL SERIGRRRAI FIAAMIALPV LPLWAFSTGA
LALAAGAFLM QISVQGAWGV IPVHLNEISP DEIRATFPGF VYQLGNLLAS GNATLQAQFA
VDHGNNYGMA LATVAGIVAV VICVLIVFSR ERRGIDMTQT AAMSPTSG