| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1944 |
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| Symbol | cpaF2 |
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| ID | 3689016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 2117474 |
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| End bp | 2118817 |
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| Gene Length | 1344 bp |
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| Protein Length | 447 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637728400 |
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| Product | type II/IV secretion system protein |
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| Protein accession | YP_333343 |
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| Protein GI | 76811090 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000254156 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACACG ACATTCAATT TGCCGACGGG GCGACGCCGT TCTCGCAAAC GCAGCAGTTT
CACGACATCA AGAACGCGGC GCACGAGCAT CTCCTCACGC GCATCGAGGA GCTGGGCGCG
GAGTTCGGGC GCTGGTCGCG GCAGGCGATC AATCAGTTCG TCGATCTCGA GATCGACAGC
TTCGTGCGGC TGCGCCGCAT TCCGCTCAAC GAGAACGAAG TGCGCGCGAT CGCCGAGGCG
CTGACCAAGG AGCTCGCGGG CTTCGGGCCG ATCGAGGACC TGCTCGCGGA TCCGCACGTC
GAGGACATCC TGATCAACGG CTACAGCGAC GTCTACGTGT CGAAGCACGG CATCCTCACG
AAGCTGCCCG TGCGCTTCAC CGACAACGCG CACCTGCTGC GGATCGTGCG GCGCATTCTC
GCGCCGATCG GCCGCCGGCT CGACGAGTCC AATCCGATGG TCGACGCGCG GCTGCCGGAC
GGCGGGCGCG TGAACGTCGT GATCGAGCCG CTGTCGATCG ACGGCCCGGT CGTGTCGATC
CGCAAGTTCC GCAAGGATCC GTTAAAGCCC GCCGATCTGC TCGCGAACGG CACCTTCAAC
GACGAGATCG GCGCGCTGCT CGAGGCCGCG GTCGTCGCGC GCTGCAACAT CCTCGTGTCG
GGCGGCACGA GCTCCGGCAA GACCTCGCTC CTGAACGCGC TCGCGTTCCA CATTCCGGGC
ATCGAGCGCG TCGTGACGAT CGAGGACACG GCCGAGCTCT CGCTCAACCA CCCGCACGTC
GTGCGGCTCG AGAGCCGCCC CGGCGGCTTC GACGGCACGG GCGTCGTGTC GATCCGCGAT
CTGCTGCGCA ACACGCTGCG GATGCGCCCG GACCGGATCA TCGTCGGCGA AGTGCGCGGC
GGCGAAGTGC TCGAGATGAT GCAGGCGATG AACACCGGCC ACGACGGCTC GATGGGCACG
ATCCACGCGA GCTCGCCGCG CGAGTGCCTG TACCGCCTCG AGATGCTCGC CGGCTTCGCG
GGCTTCCAGG GCACCGAATC GAGCCTGCGC CGGCAGATCG CGAACGCGGT CGATTTCATC
GTCCAGATCG GGCGGCTGTC GAACGGGCGG CGGCGCATCC TGTCGGTCAC CGAGGTGACG
GGGCTGTCCG ACAACATCAT CGCGACGCAG GAGCTCTACC GCTACGAGCC GCGCGTGAAC
GCGGACGGCG ACGAGATCGA CGCGTGGGAA TCGCTCGGCA TCCATCCGCA TTCGCCGAAG
CTCGCGCGCT TCAGGCAGGC ACTGTCGGGC GGCGGCTTCG GCGGCGGCGA GCCGTACGGG
CGCGGCGGAG GCTTCAATGT CTAG
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| Protein sequence | MAHDIQFADG ATPFSQTQQF HDIKNAAHEH LLTRIEELGA EFGRWSRQAI NQFVDLEIDS
FVRLRRIPLN ENEVRAIAEA LTKELAGFGP IEDLLADPHV EDILINGYSD VYVSKHGILT
KLPVRFTDNA HLLRIVRRIL APIGRRLDES NPMVDARLPD GGRVNVVIEP LSIDGPVVSI
RKFRKDPLKP ADLLANGTFN DEIGALLEAA VVARCNILVS GGTSSGKTSL LNALAFHIPG
IERVVTIEDT AELSLNHPHV VRLESRPGGF DGTGVVSIRD LLRNTLRMRP DRIIVGEVRG
GEVLEMMQAM NTGHDGSMGT IHASSPRECL YRLEMLAGFA GFQGTESSLR RQIANAVDFI
VQIGRLSNGR RRILSVTEVT GLSDNIIATQ ELYRYEPRVN ADGDEIDAWE SLGIHPHSPK
LARFRQALSG GGFGGGEPYG RGGGFNV
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