Gene BURPS1710b_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1890 
SymbolthrS 
ID3690698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2059484 
End bp2061391 
Gene Length1908 bp 
Protein Length635 aa 
Translation table11 
GC content62% 
IMG OID637728346 
Productthreonyl-tRNA synthetase 
Protein accessionYP_333290 
Protein GI76810857 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0441] Threonyl-tRNA synthetase 
TIGRFAM ID[TIGR00418] threonyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.190857 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTCGA TACGATTGCC CGACGGCTCG GTTCGCCAAT ACGAGCATCC GGTGACGGTC 
GCCGAAGTGG CGGCGTCGAT CGGCCCCGGT CTGGCGAAGG CCGCGCTCGG CGGCAAGCTC
GACGGCGAAC TCGTCGATAC GTCCGCGCTG ATCGATCGCG ACGCGTCGCT CGCGATCGTC
ACCGACAAGG ATGCCGACGG GCTCGACATC ATTCGCCATT CGACCGCCCA CTTGCTCGCC
TACGCGGTGA AGGAGTTGCA TCCGGACGCG CAGGTGACGA TCGGCCCCGT GATCGACAAC
GGCTTCTACT ACGATTTCTC GTATCACCGC CCGTTTACGC CCGAGGACCT GGAGGCGATC
GAAAAGCGCA TGCAGGAACT CGCGAAGCGG GACGAGCCCG TCACGCGCCG CGTCGTGTCG
CGCGACGAGG CCGTGTCGTA CTTCCGCAGC ATCGGCGAGA AATACAAGGC GGAGATCATC
GAATCGATTC CCGCGAGCGA CGAGATCAAG CTGTATTCGC ACGGCAGCTT CACCGATCTG
TGCCGCGGCC CGCACGTGCC GTCGACGGGC AAGCTGAAGG TTTTCAAGCT GATGAAGGTC
GCGGGCGCGT ACTGGCGCGG CGATTCGAAG AACGAGCAAC TGCAGCGGAT CTACGGCACT
GCCTGGACGA GGAAGGAAGA CCAGGACGCG TACCTGCACA TGCTCGAAGA GGCGGAAAAG
CGCGATCACC GCAAGCTCGG CAAGCAACTC GACCTGTTCC ACATCCAGGA AGAGGCGCCC
GGCATGGTGT TCTGGCATCC GAAGGGCTGG ACGCTGTGGC AGCAGGTCGA GCAGTACATG
CGCCGTCGCC TCGACGCGGC CGGCTATCTC GAGATCAAGA CGCCGATGAT CATGGATCGT
TCGCTGTGGG AGGCGTCCGG CCACTGGCAA AACTATCGCG AGAACATGTT CACGACGGAA
TCGGAGAAGC GCGACTACGC GATCAAGCCG ATGAACTGTC CGGGCCACGT GCAGGTGTTC
AAGCACGGGC TGCGCTCGTA TCGCGATCTG CCGCTGCGGT ACGCCGAGTT CGGTTCGTGC
CACCGTAACG AGGCGTCGGG CGCGCTGCAC GGGCTGATGC GCGTGCGCGG CTTCGTGCAG
GACGATGCGC ATATTTTCTG TACCGAGGAC CAGATCAACT CCGAGGCGAT CGCGTTCAAC
AAGCTCGCGA TGAGCGTCTA CGAGGATTTC GGCTTCGATC GGATCGACAT CAAGCTGTCG
CTGCGTCCCG AGCAGCGGAT GGGTTCGGAC GAGACGTGGG ACCACGCGGA AGAGGGCCTG
CGCAACGCGC TGAAGGCATG CGGCCTCGAG TGGGAGGAAC TGCCGGGCGA GGGCGCGTTC
TACGGCCCGA AGATCGAGTA CCACATCAAG GACGCGCTCG GCCGCTCGTG GCAATGCGGC
ACGCTGCAAC TCGACATGAT GCTGCCCGAG CGGCTCGGCG CCGAGTACGT GGCCGAGGAC
AACAGTCGCC GCCGGCCGGT GATGCTTCAC CGGGCGATTG TCGGCTCGAT GGAGCGTTTC
CTCGGGATTC TGATCGAGCA CCATGCTGGT GCAATGCCGG TCTGGCTCGC GCCTGCCCAC
GCGGTTGTGC TGAATATTGC CGAAAGTCAG GCGGAATATG CTCGGACTGT TGCTCAATCG
TTGCAAAAAC AAGGGCTTAG AGTGTCGGCC GATTTGCGCA ACGAGAAAAT TAGCTATAAA
ATACGCGAGC ACACGCTCGA AAAAGTTCCC TATCTGCTCG TCGTAGGCGA CAAGGAGCGT
GAAGCACAAA CGGTAGCCGT GCGTGCCCGT GGCGGCGTCG ATCTGGGTGT CATGCCCGTC
GAAGCCTTCG TTGAGCGTCT GCGTGAGGAC ATCCAGGCGT TCAAGTAA
 
Protein sequence
MVSIRLPDGS VRQYEHPVTV AEVAASIGPG LAKAALGGKL DGELVDTSAL IDRDASLAIV 
TDKDADGLDI IRHSTAHLLA YAVKELHPDA QVTIGPVIDN GFYYDFSYHR PFTPEDLEAI
EKRMQELAKR DEPVTRRVVS RDEAVSYFRS IGEKYKAEII ESIPASDEIK LYSHGSFTDL
CRGPHVPSTG KLKVFKLMKV AGAYWRGDSK NEQLQRIYGT AWTRKEDQDA YLHMLEEAEK
RDHRKLGKQL DLFHIQEEAP GMVFWHPKGW TLWQQVEQYM RRRLDAAGYL EIKTPMIMDR
SLWEASGHWQ NYRENMFTTE SEKRDYAIKP MNCPGHVQVF KHGLRSYRDL PLRYAEFGSC
HRNEASGALH GLMRVRGFVQ DDAHIFCTED QINSEAIAFN KLAMSVYEDF GFDRIDIKLS
LRPEQRMGSD ETWDHAEEGL RNALKACGLE WEELPGEGAF YGPKIEYHIK DALGRSWQCG
TLQLDMMLPE RLGAEYVAED NSRRRPVMLH RAIVGSMERF LGILIEHHAG AMPVWLAPAH
AVVLNIAESQ AEYARTVAQS LQKQGLRVSA DLRNEKISYK IREHTLEKVP YLLVVGDKER
EAQTVAVRAR GGVDLGVMPV EAFVERLRED IQAFK