| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1877 |
|---|
| Symbol | scoA |
|---|
| ID | 3691580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 2048780 |
|---|
| End bp | 2049484 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637728333 |
|---|
| Product | 3-oxoadipate CoA-succinyl transferase alpha subunit |
|---|
| Protein accession | YP_333278 |
|---|
| Protein GI | 76811222 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR02429] 3-oxoacid CoA-transferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0683608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG TCTACCCAAG CGCGGCTGCC GCGCTCGAGG GCGTCGTCCA TGACGGGCAG
ACCTTCGCGG TCGGCGGCTT CGGCCTGTGC GGCATTCCGG AAGCGCTCAT CGCCGCGCTG
CGCGATTCGG CGGTGAAGGG CATCACCTGC ATCAGCAACA ACGCGGGCGT TGACGGCTTC
GGCCTTGGCC TGCTGCTCGA AACCCGGCAA ATCAAGAAGA TGATCTCGTC GTACGTCGGC
GAGAACAAGG AGTTCGAACG CCAGTATCTG TCGGGCGAAC TCGAGCTCGA GTTCACGCCG
CAGGGCACGC TCGCGGAGAA GCTGCGCGCG GGCGGCGCGG GCATCCCGGC GTTCTTCACG
CAGACGGGCT ACGGCACCGT GATCGCCGAA GGCAAGGAGA CGCGCGAGTT CGACGGCAAG
CATTACGTGC TCGAGCCGTC GCTCACGGCG GACGTCGCGC TCGTGAAGGC TTGGAAAGCC
GACAGGTCGG GCAACCTGGT TTACCGGCGC ACCGCGCGCA ACTTCAATCC GATGTGCGCG
ATGGCGGGCC GGATCACGAT CGCCGAGGTC GAGGAGATCG TCGAGAACGG CGAGCTCGAT
CCGGATGCGA TCCACACGCC CGGCATTTTC GTGCAGCGGC TCGTGCTCAA CGCGACGCCG
GAAAAACGCA TCGAACAACG CGTCGTGCGC GCGAAAGGAG ACTGA
|
|---|
| Protein sequence | MNKVYPSAAA ALEGVVHDGQ TFAVGGFGLC GIPEALIAAL RDSAVKGITC ISNNAGVDGF
GLGLLLETRQ IKKMISSYVG ENKEFERQYL SGELELEFTP QGTLAEKLRA GGAGIPAFFT
QTGYGTVIAE GKETREFDGK HYVLEPSLTA DVALVKAWKA DRSGNLVYRR TARNFNPMCA
MAGRITIAEV EEIVENGELD PDAIHTPGIF VQRLVLNATP EKRIEQRVVR AKGD
|
|---|
| |