Gene BURPS1710b_1876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1876 
SymboltdiS 
ID3691641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2047982 
End bp2048527 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID637728332 
ProductLuxR family transcriptional regulator 
Protein accessionYP_333277 
Protein GI76808631 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0402354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGCCA TCGATTACAA GACCGCCTTC CATCTCGCGC CGATCGGCCT CGTGCTGTCG 
CGCGACCGCG TCATCGAGGA TTGCAACGAC GAACTCGCCG CGATCTTCCG CTGCGCGCGC
GCCGATCTGA TCGGCCGCTC GTTCGAAGTG CTCTACCCGT CGTCGGACGA ATTCGAGCGG
ATCGGCGAGC GGATCTCGCC CGTGATGATC GCGCACGGCA GCTATGCGGA CGATCGCATC
ATGAAGCGCG CGGGCGGCGA GCTGTTCTGG TGCCACGTGA CGGGCCGCGC GCTCGATCGT
ACGGCGCCGC TCGCGGCGGG CGTGTGGACG TTCGAGGACC TGAGCGCGAC GCGGCGCGTC
GCGGTCGAGC TGACGCCGCG CGAGCGCGAG ATCGCCGCGC AGCTCGTGAC GGGCAAGACG
AGCAAGCAGA TCGGCCGCGT GCTCGACATC AGCTCGCGCA CGGTCGACAT CTATCGCGCG
CGGCTGATGC GCAAATACGG AACCGGCAAC ACGGCGGAAC TGCTGCAGCG CCTGCTCGGA
CAGTGA
 
Protein sequence
MPAIDYKTAF HLAPIGLVLS RDRVIEDCND ELAAIFRCAR ADLIGRSFEV LYPSSDEFER 
IGERISPVMI AHGSYADDRI MKRAGGELFW CHVTGRALDR TAPLAAGVWT FEDLSATRRV
AVELTPRERE IAAQLVTGKT SKQIGRVLDI SSRTVDIYRA RLMRKYGTGN TAELLQRLLG
Q