| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1854 |
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| Symbol | |
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| ID | 3691292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 2027694 |
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| End bp | 2029541 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637728310 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family protein |
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| Protein accession | YP_333255 |
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| Protein GI | 76812230 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGGGA CGCTTGCACT CGCGGTTCTT GCAATCTCAT TAATAATGGC CGGATGCGCA
AGCATGGGCG ATGTTGCACC GCAAGACAAG CAGGTCGATC CGGCGTCGCT CGATGCGGGC
GCGGCGATCG CGGCGGCCGA GCGCGACGCC GGCTGGCCCG CGGCCGACTG GTGGCGCGCG
TATCGCGATC CGCAGCTCGA TTCGTGGATC GCCGCGTCGC TCGCCGGCAA CCCTTCGCTC
GCCGCCGCGC AGGCCCGCGT GCGCGAGGCG CAGTCGCTCG CGCGCATCGC GCACGCCGAG
GAGCTGCCGC AGTTGAACGG CAACCTGTCG CTGATGCGCC AGCACTGGCC GGACAACGTC
TATTACGGCC CGGGCCCGCT CGCGAACGCC GACACGTGGA ACAACACGGG CACGCTGAGC
CTGTCGTACC ACCTCGATCT GTGGGGCAAG GACAAGCACA ACGCCGAGCG CGCGCTCGAC
GCGGCGCGCG CCCGCGCGGC CGACGCGCGT GCCGCGCAGC TCGAGCTCGA GGCGAACGTC
GTGCGCGCGT ACGTCGATTT CGCGAAGAAC TACGCGCTCC TCGACATCGC GCACGCGACC
TACGAGCGCC AGAACGCGCT CGCCGAACTG GCGCGCAAGC GCCTGCGCGC GGGCATCGGC
ACGCAACTCG AGGTAAGCCA GGCCGAAGCG CCGCTGCCCG ATTATTCGCG GCAGATCGAC
TCGTATGAAG AGGCGATCCA GCTCGGCCGT CACCAGCTCG CCGCGCTCGC GGGCAAGGGG
CCGGGCGCGG GCGCCTCGCT CGCGCGGCCG AAGCTCGCGC TCGACGCGAA CGCCGCCCTG
CCGTCCGCGC TGCCCGCCGA GCTGCTCGGC CGCCGGCCGG ACATCGTCGC CGCGCGCTGG
ATGGTCGACG CGCAGGCGCG CGGCATCGAC GTCGCGAAGG CCGCGTTCTA TCCGAACGTC
GACCTGATCG CGTCGCTCGG CGGCTTCGCG GTCAGCGCGC CGTTCGCGAC GTTCCTGCGC
GCGATGAACG GCGGCTGGTC GGCCGGCCCC GCGCTCACGC TGCCGATCTT CGAGGGCGGC
CGGCTGCGCG CGCAACTGGG CGTCGCGTCG GCGGGCTACG ACCAGGCGGT CGAGCACTAC
AACCAGACGA TCGTCGGCGC GCTGAAGGAC ATCGCCGACA ACGTCGTGCG CCTGCATTCG
CTCGATTCGC AGCAAAAGGA CGCGGCGCGC GCGGTCTCGC TCACGCGGCG CTCGTACGAT
CTGTCGCATG CGGGCTTCAG CCGCGGGCTC ACCGATTACG TGAACGTGCT CATCGCGCAG
AGCCAGTTGC TGACCGCGCA GGAGAACCAG ACCCGCATCG AGGCCGCGCG CCTCGCCGCG
CACGCGTCGC TGATGGTCGC GCTCGGCGGC GGGCTCGAAA CCGGGCGCGA CGCGCCGCAC
GACGCGCCCG CGGGCGACGC GCGGCGGACG GGTGCTTCGG GTGCTTCGGG TGCTTCGGGT
GCTTCGCGTG CTTCGCGTGC TTCGGGTGCT TCGGGTGCTT CGGGTGCTTC GGGTGCCTCG
GGTGCCTCGG GTGCCTCGGG TGCCTCGGGT GCCTCGGGTG CCTCGGGTGC CTCGGGTGCT
TCGAGCACCG CGGGCGCTTC GGCCACCGCA TCCGCGTCGG CCGCCGGCCA CGCGCCGGCT
GGCGCCGCTG CTCCGGCATC GCCCGCCGGC ATCCGCGCGG CCGCCAGCGC TCGCGCGTCA
ATGCCGGCTC CCGCCGCGGC GGCGACCGCG CCCGCCTTCG CGTCGCCCGT CGCCGGCGCC
TCGACGCCGA TGCCCGCTGC GACAGCGGCA GCCCGCGCCG CCCGCTAA
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| Protein sequence | MRGTLALAVL AISLIMAGCA SMGDVAPQDK QVDPASLDAG AAIAAAERDA GWPAADWWRA
YRDPQLDSWI AASLAGNPSL AAAQARVREA QSLARIAHAE ELPQLNGNLS LMRQHWPDNV
YYGPGPLANA DTWNNTGTLS LSYHLDLWGK DKHNAERALD AARARAADAR AAQLELEANV
VRAYVDFAKN YALLDIAHAT YERQNALAEL ARKRLRAGIG TQLEVSQAEA PLPDYSRQID
SYEEAIQLGR HQLAALAGKG PGAGASLARP KLALDANAAL PSALPAELLG RRPDIVAARW
MVDAQARGID VAKAAFYPNV DLIASLGGFA VSAPFATFLR AMNGGWSAGP ALTLPIFEGG
RLRAQLGVAS AGYDQAVEHY NQTIVGALKD IADNVVRLHS LDSQQKDAAR AVSLTRRSYD
LSHAGFSRGL TDYVNVLIAQ SQLLTAQENQ TRIEAARLAA HASLMVALGG GLETGRDAPH
DAPAGDARRT GASGASGASG ASRASRASGA SGASGASGAS GASGASGASG ASGASGASGA
SSTAGASATA SASAAGHAPA GAAAPASPAG IRAAASARAS MPAPAAAATA PAFASPVAGA
STPMPAATAA ARAAR
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