Gene BURPS1710b_1838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1838 
Symbol 
ID3688268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp2005690 
End bp2006727 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content73% 
IMG OID637728294 
Producthomoserine dehydrogenase 
Protein accessionYP_333239 
Protein GI76808892 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGTCA GTCACAGCGC CGCTGCGGTG CGCATCGGCA TCGCGGGGCT CGGCCGGCTC 
GGCCGGCGCC ACGCGGAGAA CCTCGCGCGG CGCGTCGCGG GCGCGCGGCT CGCGGCCGCG
TGCAGCCCGC TTGCCGACGA GTGCGCGTGG GCGCGCGAGA CGCTCGCCGT GCCGCGCGTC
TACGAGGATT TCGACGCGCT CGCGGCCGAT CCCGAGCTCG ACGCGCTCTG GCTCGTCACG
CCGTCGGCGC TGCACGCGGA CCAGATCGTC GCCGCGTTGC GCGCGGGCAA GCACGTGTTC
TGCGAGAAAC CGCTGTCGCT CGATCTCGGC GAATGCGAGC GGGTGCTCGC CGAGGCGCGC
GCGCGGCCGC ATCTCGTCGC GACGATCGGT TTCATGCGCC GCTTCGATCC GAGCTATCGC
GACGCGTACG CGCGCGTCGC GGCGGGCGAG ATCGGCCGGC CGTTCCTCGT GCGCTCGCAG
ACCTGCGACC GGAACGATCC CGAGGGCTTT TTCGTGCGCT TCGCGCCGAG CTCGGGCGGC
ATCTTCCTCG ATTGCACCGT GCACGACATC GACGTCGCAC GATGGCTGCT CGGCGCGCCG
CGCGCGACGC GCGTGTACGC GGCGGGCGCG GTCGCGCTGC ACGAGGGGCT GCGCGCGTGC
GGCGACGTCG ACAACGGCGT CGCGATCTGC GAGTTCGAAG GCGGCCGGCT CGCGATGTTC
TATGCGTCGC GCACGATGGC GCACGGCAAC GACACGCACT CCGAAGTGAT CGGCACGGCG
GGCGCGCTCG CGATCGGCCG CAACCCGCGC GCGAACCGCG TCGAGATCTA TGATGCGGCG
GGCATCCGCA ACACCTGCAC GCCGACGTTC TTCGACCGCT TCGAGGATGC GTTCCTGATC
GAGGCGCAGG CGTTCGTCGC GGCGGTGCGC GGCGAGGGCG CCGCCGGCGG CGCGACGCTC
GCGGACGCGC TCGAGGCGAC GAGGATCGGC CATGCGCTGC GCGAATCGTT GCAGACCGGG
CGGGCGATCG AGCTGTAG
 
Protein sequence
MIVSHSAAAV RIGIAGLGRL GRRHAENLAR RVAGARLAAA CSPLADECAW ARETLAVPRV 
YEDFDALAAD PELDALWLVT PSALHADQIV AALRAGKHVF CEKPLSLDLG ECERVLAEAR
ARPHLVATIG FMRRFDPSYR DAYARVAAGE IGRPFLVRSQ TCDRNDPEGF FVRFAPSSGG
IFLDCTVHDI DVARWLLGAP RATRVYAAGA VALHEGLRAC GDVDNGVAIC EFEGGRLAMF
YASRTMAHGN DTHSEVIGTA GALAIGRNPR ANRVEIYDAA GIRNTCTPTF FDRFEDAFLI
EAQAFVAAVR GEGAAGGATL ADALEATRIG HALRESLQTG RAIEL