Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1819 |
Symbol | mucD |
ID | 3691799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1984889 |
End bp | 1986445 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637728275 |
Product | hypothetical protein |
Protein accession | YP_333220 |
Protein GI | 76810816 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCTCGTC AAACGCTTGG CCGCGCCCTG ATTCACGTTG CAGCGCTCGG GGCGGTGCTT GCCGGCTTCG CTTGCCTGCA GCCGACGCCA CTCGCCGCGG GTACGCTGCA ATCGCCGGCG AAGGCGAAGC GAATCGCGCA GATCGGCGCC GCGGGGCCGG TCGATTTTCC CACGCTCGTC GAGCGATACG GGCCCGCCGT CGTCAGCGTG AGCGTGCCTG CGCAGGATCC GCAGATGTCG GCGTCCGGCC TCGAGGCGCT CGATCCCGAC GATCCGTTCT TCGCCTACTT CAAATCCGCC GCCACGCAGC CCGCACTGTC GCCGGAGAAC GGGCCGCGCG CGATGGCGGG CGCCGGATCC GGTTTTATCG TCGGCGCCGA CGGGATCATC CTGACGACCG CGTACGTGGT CGGGCAGGCG AGCGAGGCGA CGGTTCGCCT GATCGACCGG CGCGAATTCA AGGCGCGGGT GCTGGCCGTC GATGATTCGA GCGATGTGGC CGTGTTGCAG ATCGACGCGA CGAAGCTGCC GACGGTGCGG CTCGGCGATT CGTCCCGGGT GCGCACGGGC GAGCCGGTGC TGACGATCGG CACGCCGGAC GGCTCGGCGA ACACGGTGAC GACGGGCATC GTCAGCGCGA CGGCGCGCAT GTTGCCCGAC GGCGGCCGCT TTCCGTTCTT CCAGACCGAC GTGACCGGCA ACCTCGACAA CTCGGGCGGC CCGGTGTTCA ACCGCGCGGG CGAGGTGATC GGCATCGACG TGCAGATCTA CGGCAGCGGC GAGCGCAATC CGGGCGTGAC GTTTGCGATT CCGATCGACA TGGCGATGAA GGTGCGTGCG CAGGTGCTGC AGGCGCAGCG CCAGGCGCGG CAGCAGGCGC AGCCGCCGAT GCAACAGGCG CAACAGGCGC AACAAGCGCC GCCCGCGGCG GCGCAGAACG CGCTGGGCGT CGACGCGCAG GACGTCGGTC CGGGGCTCGC GGCGGCGTTC GGCCTGCCGC GGCCGGCGGG CGCGCTTGTC AATGCGGTGG AGCCGGGGTC GCCGGCGGCG GCGGTCGGGC TGAAGCCGGG CGACGTGATC GTGCAGATCG GCGATCGGCC GCTCGGCCGC TCGGCGGAAC TGGCCGGCGA CCTCGCGGCG CTGCCGCCCG GGGCGAGCGC GCCGATCACG CTGATCCGCA ACCGGATGCC GATGACGGTG ATGCTCGGCT CCGGCGCGGC CGCGAGCGCG CCGACAGGCG CGACCGCATC GCCGGGCAAT GCGGCCGCCG GCCGCAGCGA GACGGGCGGC GCGGACCGCC TGGGCCTGAC GATGCATCCG CTGACGGACG ACGAGCGGCG CTCGACGGGA TTGCCCGTCG GCATGGTGGT CGATGCGGTG CGCGGGCCGG CGGCGAACGC GGGGATTCGG CCGGGCGACG TCGTGCTGGA GCTCGACGAT ACGCTGATCG AGACGCCGGA CATGGTGCCG GCGCTGGAGG CGAAGGCGGG GAAGGTGGTC GCGGTGCTGA TTCAGCGGGG GAGCGAGCGC AGGTTCGTGT CGGTGAAGGC GCGGTGA
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Protein sequence | MSRQTLGRAL IHVAALGAVL AGFACLQPTP LAAGTLQSPA KAKRIAQIGA AGPVDFPTLV ERYGPAVVSV SVPAQDPQMS ASGLEALDPD DPFFAYFKSA ATQPALSPEN GPRAMAGAGS GFIVGADGII LTTAYVVGQA SEATVRLIDR REFKARVLAV DDSSDVAVLQ IDATKLPTVR LGDSSRVRTG EPVLTIGTPD GSANTVTTGI VSATARMLPD GGRFPFFQTD VTGNLDNSGG PVFNRAGEVI GIDVQIYGSG ERNPGVTFAI PIDMAMKVRA QVLQAQRQAR QQAQPPMQQA QQAQQAPPAA AQNALGVDAQ DVGPGLAAAF GLPRPAGALV NAVEPGSPAA AVGLKPGDVI VQIGDRPLGR SAELAGDLAA LPPGASAPIT LIRNRMPMTV MLGSGAAASA PTGATASPGN AAAGRSETGG ADRLGLTMHP LTDDERRSTG LPVGMVVDAV RGPAANAGIR PGDVVLELDD TLIETPDMVP ALEAKAGKVV AVLIQRGSER RFVSVKAR
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