Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1771 |
Symbol | |
ID | 3690362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1924245 |
End bp | 1927085 |
Gene Length | 2841 bp |
Protein Length | 946 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637728227 |
Product | Rhs element Vgr protein |
Protein accession | YP_333172 |
Protein GI | 76810168 |
COG category | [S] Function unknown |
COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR01646] Rhs element Vgr protein [TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.156841 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGATCC CCACTGACGT TCTGCAAGCA CTCTTCGGCG GCTGGTCGCA ACACGACCGC TTTCTCTGGA TCACGACGCC GCTCGGCGCG AACGCGCTCG TCGCGGAAAG CCTGCACGGC TGGGAGGCGC TCGACGATGG CGGCTTCCGT TTGCAGCTCA CCGCGCTCGC CGAGCATCCG TCGCTGCCGC TCGCGCAACT GATCGGTGCG CCGATCCTGA TCGAATGGCA GGCGCAGGAA GGGCGCGACG CGCGCCGGCC GTTCCACGGC CACGTGATCG CCGCCGAGCT CGTCGGCTAC AACGGCGGAC TCGCACGCGT GCGGCTCGTC GTCGAGCCGT GGCTCACGCT GTTGCGGCAG CGCGTCGACA GCTACAACTA TCTGGACGCG AGCGTCGTCG AGATCAGCGA ACAGGTGTTC CGCCGTTACG CGCGCGGCGT GATCGCGCCC GCATGGCGAT GGGCGCTCGC CGATGCGGCG AAGTACCCGA AGCGCAGCTT GACCGCGCAA GCCGGCGAGT CCGATTTCGA CTTCCTCGAG CGGCTCTGGG CGGAGGAGGG CATCTTCTAC TGGTTCGAGC ACGAAGGCGA CGCGCGCGCG TCGAGCCTCG GCAAGCACAC GCTCGTGCTC GCCGATTCGA ATCAGCGCTT CGCGCCGGAC GAACCGGAGA TCGTCGGCTT TCATCAGACG AGCGACGACG ACCCGCAAGG CTGCATCCAG CACTTCATGC ACGCGCGGCG TTGGCGCATC GGCAGCGTCG CGCGCGCGAG CTGGGATCAC CGCAGCCTGT CGACGCGTCC GACGGGCGCG CGCGCGAACG GCGCGGTCGC GCCGGGCGAG GATCGCGACG TCGCGGGCCC GTACGCATAC CAGACGGGCG CGATCGGAGA CCGGCGCGCG CAGCAGCAAC TCGACGCCCA GCGCGTGGCC GCGCTGCGGA GCGAAGGCCG CAGCACGCGC CGCGATCTGC GGCCCGGGCT GCGTTTTGCG ATCGCGCATC ATCCGACGCT CGGCGTATCG GATGCGTTCA TCTGCCTGCG CGTCGAGCAT TCGGCGCGCG CGAACGTCGA TGCGACCGTG CGCAGCGCGA TCGAACAGCG CCTCGGCGCG ATTGCGTCGA TCGCCGGCGC CGCGCCGGTG CCGCATGGCC CCGCGAGCGC GCTGAATGCG GCGCTCGGCG CCGATACGCA TCACGGCGGA TCGCTGATGC GGGACGACGC CGTCTATCGC AATCGCTTCG TCGCGTTGCC CGCCGAGCAG ACGTATCGGC CGCTCGCCGC ATCCGGCCAT GGCGCGCGCA TGCACCCGGT CGCCGTGATG CCGGGGGCGC AGACGGCGAT CGTCGTGGGC GCGGGCGATC CCGTTCACAC CGACCGGGAT CACCGGATTC GAATCCAGCA CCACGCGCAG CGCGGCGAGA ATGCGGCGAG CCGCGACGAT CACCCGCATG CGGCGAACGC GCCGGCGAAC CGTGGCGCGG GCACGTGGAC GCGGATGATG ACGCCCGTGG GCGGCGATAA CTGGGGTGGG GTGAGCGTGC CGCGCGTCGG GCAGGAAGTG TGGACCGAAT GGCTCGAAGG CCAGCCCGAC CGGCCGGTTG CGGTGGCCGC GCTCTACAAC GGCCGCGGCA ACGCGCACGC GCAGCACAAC GCGCAGGCGG GAGGGCCGAG CGGCAGCACC GGCAATGCGG CCGCATGGTT CGCCGGCAAT GCGCATGCGG CGGTGCTGAC GGGTTTCAAG ACGCAGGACA TGAGCATGAG CCAGCAAGGC ACGGGCGGCT ATCGGCAATT CATGCTCGAC GATACGGCGG GCCAGTCGAG CGCGCGCCTG TACACGACGG ACCGCAACAG CGGGCTCACG CTCGGGCACG TGAAGCAGAC GCAGGACAAC CGGCGCCAGG CCGATCGCGG CTATGGCGCG GAACTGGCGA CGGATGCCGC CGGCGCGCTG CGCGGCGGCG CGGGGCTCTT GATCAGCACG GCGCCCGGCG TGAGCCAGAT GGATGCGAGC GCGCCGAGCC AGGTGCTCGC TCAGCATCGA CAGACGTTGC AAAGCCTCGC GGCGCTCGCG CACAAGCAGG GCGCGGAGCC GGGCGGTGCG GTGCCCGAGG CGGCGGGCGG AGCGGGCGCG GCGTCGGCGT CGACGGGGGC GGCGGCGGAC AAGCCTTTGC CGGCCGTCGA TGGCATCGAG CAGAGCCGTG AAGCGATCGG CGCGACGCGT GAAGGAAGCG GCGGCGATAC GGCAGGCGGC GGGGGCGGCG GCGCGATTGC GTGGAGCAAG CCGCATCTCG TCGCACACGG CGAGGCGGGG CTGGCCGCGA TGTCGGCGAA GAGCCACGTG TGGGTGTCGG GTACCGAGAC GGTGTTGAGC GCCGGACAGG ACGTGCAATT GACGGCGAAG GGCAAGACGA GCGTCGTCGC GAATCACGGC ATCTCGCTGT ATACGCAGGG CGCGGCGGGC GACGGGCGGC CGGTTGCCGG CCGGGGCATC GCGTTGCACG CGGCGTCCGG CGCGGTGAGT GTGCAAGCGC AGAACGCCGG CAAGCTGAGC GCGAGCGCGC AGAAGGCGGT GACGCTCGCG AGCGCGCAAG GCAGCGCGTC CGTGCAGGCG CAGCAGCGCG TCCTGCTGAG CGCGGCGAAG GCCTATCTGA AGATGGAAGG CAACGACATC GTCGTCGGCG CGCCGGGGCG CGCGGATTTC AAGGCGGCGG CGCATCAGTT GACGGGGCCG AAGAGCGCGG GGGCGTCAGC GCAAATGCCG AAGAGCGAAC CGAAGCTGTG CGAGTACAAG ACGCGCGCGG CCGACGTTGC TCACGAAGGC ACGATGAAGT CGGCGGCTTG A
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Protein sequence | MSIPTDVLQA LFGGWSQHDR FLWITTPLGA NALVAESLHG WEALDDGGFR LQLTALAEHP SLPLAQLIGA PILIEWQAQE GRDARRPFHG HVIAAELVGY NGGLARVRLV VEPWLTLLRQ RVDSYNYLDA SVVEISEQVF RRYARGVIAP AWRWALADAA KYPKRSLTAQ AGESDFDFLE RLWAEEGIFY WFEHEGDARA SSLGKHTLVL ADSNQRFAPD EPEIVGFHQT SDDDPQGCIQ HFMHARRWRI GSVARASWDH RSLSTRPTGA RANGAVAPGE DRDVAGPYAY QTGAIGDRRA QQQLDAQRVA ALRSEGRSTR RDLRPGLRFA IAHHPTLGVS DAFICLRVEH SARANVDATV RSAIEQRLGA IASIAGAAPV PHGPASALNA ALGADTHHGG SLMRDDAVYR NRFVALPAEQ TYRPLAASGH GARMHPVAVM PGAQTAIVVG AGDPVHTDRD HRIRIQHHAQ RGENAASRDD HPHAANAPAN RGAGTWTRMM TPVGGDNWGG VSVPRVGQEV WTEWLEGQPD RPVAVAALYN GRGNAHAQHN AQAGGPSGST GNAAAWFAGN AHAAVLTGFK TQDMSMSQQG TGGYRQFMLD DTAGQSSARL YTTDRNSGLT LGHVKQTQDN RRQADRGYGA ELATDAAGAL RGGAGLLIST APGVSQMDAS APSQVLAQHR QTLQSLAALA HKQGAEPGGA VPEAAGGAGA ASASTGAAAD KPLPAVDGIE QSREAIGATR EGSGGDTAGG GGGGAIAWSK PHLVAHGEAG LAAMSAKSHV WVSGTETVLS AGQDVQLTAK GKTSVVANHG ISLYTQGAAG DGRPVAGRGI ALHAASGAVS VQAQNAGKLS ASAQKAVTLA SAQGSASVQA QQRVLLSAAK AYLKMEGNDI VVGAPGRADF KAAAHQLTGP KSAGASAQMP KSEPKLCEYK TRAADVAHEG TMKSAA
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