Gene BURPS1710b_1681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1681 
Symbolsb5 
ID3688895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1800539 
End bp1801225 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content56% 
IMG OID637728137 
Producthypothetical protein 
Protein accessionYP_333084 
Protein GI76810325 
COG category[R] General function prediction only 
COG ID[COG3740] Phage head maturation protease 
TIGRFAM ID[TIGR01543] phage prohead protease, HK97 family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAACGCA AGAACGGTAA AGGCGGCTAC AAGGTCCGTG CCTTTGATCT CGACGTCAAG 
TCAGTCGACG ATGCAGGTCA GTTTTCGGGA TATGGGTCGG TATTCGGAGT GGTCGACAGC
TATAAGGAAA TTGTGGCGCC GGGGGCATTT TCAAACAGTC TCGATGCGCT CAAGAAGAGC
GGCCGGGCGT TGCCGGTTCT GTGGCAGCAC GACTCCTATA CGCCGATCGG ATCATGGGCC
GGCCTCAAGG AGGACGACAA GGGTCTCTAC GGGGATGGCG ATCTGTGGAT CGACGAAGCG
CCGAACGCAA GGATCGCGTA TCGCGGAATG AAGGCAAAGG CCATCACGGG ACTGTCGATC
GGCTATTACG TGCTCTCGTC GGATTACAAC GAAAAAACGG GGATTCGCAC GCTGAACGAA
GTCGATCTAG TCGAGATCAG CATCGTTACG AATCCGGCAA ACGCGAATGC GCGAATCGAC
GCGGTGAAAT CGATCATCGC GCACGGCGGA TTGCCATCGC TTCCGGAATT CGAGCGGTTC
CTGCGTGAGG CAGGCTTCTC GAAGTCCATG GCCGCGGTTA TCGCCAATCG CGGCCTGAAA
CATCTGCTCC AGAGTGAGTC TGGTGACATG GCGAACGACG TGAATCGGCT GCTCGACGGC
CTCAAATCTC TTACTTTCAA GGAATGA
 
Protein sequence
MQRKNGKGGY KVRAFDLDVK SVDDAGQFSG YGSVFGVVDS YKEIVAPGAF SNSLDALKKS 
GRALPVLWQH DSYTPIGSWA GLKEDDKGLY GDGDLWIDEA PNARIAYRGM KAKAITGLSI
GYYVLSSDYN EKTGIRTLNE VDLVEISIVT NPANANARID AVKSIIAHGG LPSLPEFERF
LREAGFSKSM AAVIANRGLK HLLQSESGDM ANDVNRLLDG LKSLTFKE