Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1681 |
Symbol | sb5 |
ID | 3688895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1800539 |
End bp | 1801225 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637728137 |
Product | hypothetical protein |
Protein accession | YP_333084 |
Protein GI | 76810325 |
COG category | [R] General function prediction only |
COG ID | [COG3740] Phage head maturation protease |
TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCAACGCA AGAACGGTAA AGGCGGCTAC AAGGTCCGTG CCTTTGATCT CGACGTCAAG TCAGTCGACG ATGCAGGTCA GTTTTCGGGA TATGGGTCGG TATTCGGAGT GGTCGACAGC TATAAGGAAA TTGTGGCGCC GGGGGCATTT TCAAACAGTC TCGATGCGCT CAAGAAGAGC GGCCGGGCGT TGCCGGTTCT GTGGCAGCAC GACTCCTATA CGCCGATCGG ATCATGGGCC GGCCTCAAGG AGGACGACAA GGGTCTCTAC GGGGATGGCG ATCTGTGGAT CGACGAAGCG CCGAACGCAA GGATCGCGTA TCGCGGAATG AAGGCAAAGG CCATCACGGG ACTGTCGATC GGCTATTACG TGCTCTCGTC GGATTACAAC GAAAAAACGG GGATTCGCAC GCTGAACGAA GTCGATCTAG TCGAGATCAG CATCGTTACG AATCCGGCAA ACGCGAATGC GCGAATCGAC GCGGTGAAAT CGATCATCGC GCACGGCGGA TTGCCATCGC TTCCGGAATT CGAGCGGTTC CTGCGTGAGG CAGGCTTCTC GAAGTCCATG GCCGCGGTTA TCGCCAATCG CGGCCTGAAA CATCTGCTCC AGAGTGAGTC TGGTGACATG GCGAACGACG TGAATCGGCT GCTCGACGGC CTCAAATCTC TTACTTTCAA GGAATGA
|
Protein sequence | MQRKNGKGGY KVRAFDLDVK SVDDAGQFSG YGSVFGVVDS YKEIVAPGAF SNSLDALKKS GRALPVLWQH DSYTPIGSWA GLKEDDKGLY GDGDLWIDEA PNARIAYRGM KAKAITGLSI GYYVLSSDYN EKTGIRTLNE VDLVEISIVT NPANANARID AVKSIIAHGG LPSLPEFERF LREAGFSKSM AAVIANRGLK HLLQSESGDM ANDVNRLLDG LKSLTFKE
|
| |