| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1675 |
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| Symbol | |
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| ID | 3688902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 1791577 |
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| End bp | 1795038 |
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| Gene Length | 3462 bp |
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| Protein Length | 1153 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637728131 |
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| Product | patatin family phospholipase |
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| Protein accession | YP_333078 |
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| Protein GI | 76810332 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | [TIGR03607] patatin-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.160434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGCG AAAATTGCGA GGAACTTCGG CTCGCATTGG TCATGAATGG TGGCGTGAGT
CTAGCCATCT GGATGGGAGG AGTGACCAAT GAGATCTTCC GACTCGTCAA GGAGCAGCAT
CCCGTCTATG CAGCGTTGCT GGCGATGACG CGTACGGTCC CACGCGTCGA CGTGATCAGC
GGAACAAGTG CGGGTGGGAT CAATGGTGCA GCCTTGGCGA TCTCACTCCT ATACGATGGG
GAATTCTCGG AATTGCGTGA AGTGTGGATG AAAACGGCCA CATTCAATGA CCTGCTTCGT
CCACCGCTAG GAAAGAACCC GGGATCACTG CTGAAAGGGG ACGAATATTT CCTGCCAGGC
ATTCGGAATG CACTGCAGCA TATGGCTAGG AATAGAGATG CCGCACGGAC GGATTTGCCA
ATCGATCTGC GATTGACGAC AACACTGCTA TCCGGAGTCC AAGGCAATAC AGTTGATGAT
CTCGGAACGC CCGTCCACGA TGTGGATTAC CGGGCTTATT TTCATTTCAC TAACATGGCG
TCACACGGGA CGCCCTCCCC ACAAAGTGCG TTTGATTCAA CCAATGACTT TGATGACCGT
ACCGACGTTC TTGATCGCCT CGCTCGCGCC GCGCGCTCAA CGGCCTCGTT CCCCTTCGCC
TTTGAACCCT CACTGGTTGG AACAGATGGG AAGCCCTCCA GTTTAAAGGG GAGGTTCGGC
GACGATTTGA AAGTTCCTCG ATATGTGGTG GATGGGGGAG TTTTAGACAA TAAGCCGTTC
CGAGGTGCAC TCGAGGCAAT GCTTCAGATG GGACGAAGGG GCAGTGTGCG TCGGGTGCTG
GCGTATATCA ATCCCGATCC GGGTGACGGT CCTCCCGGAC AGCCCGGCGC AACCATGCCG
CCGTTGTCTG CAGTTTTGAC AGCAAGCCTG CTTGGAATCC CGCAATCGCA AACCATTGCA
GATCAACTGC AGGAAATCAG ATCCCACAAC GATGCCGTAC GCCATCGGCG CAATAATGTC
CTCAGCCTTG TTCAGAATCT CGATGCTGCA ACCTTGGAAA GCATGGCTCA GACACTGTTT
CCAATCTATC GCAAGCGACG TATCGCGGAT GTGTTCGAGA GCGTATGTGA GGATCTGCAG
ATTGAGGGTG CACCTGGTCG ACTTGTGGGC AAGCGAGGTC GCGAGCAAAT GCGGTATGTG
TTCGACCAGG GCAACTGGAG TGGATGGATC CCGAACGATT GGCCAAGTAG CCCAGACCAG
CCGTGCAACC AGCCAGAGAG CTGGGCATGG GGTATGTTCC CGGTTGAGTT CGCAGCAAAG
ATCATGCTCG ATCTACTGCG AATCACACAA AATCTATATG ACTATGCATA CCCACCGGAG
TCACCAGCGG CCAGATACGC AGCACTAGGT ATAAGTGCCC CGTTCCAATT GGACCAATGG
GGCAATTTTG ACATGAGCGA GCTTTCGCCT TCGCTGGTGG CCAGGCTGCA AAGCACGGTG
GCGGCGTGGC GGCACAGAGG CAAACCGACC GTCAGCGAGG ATTGGCATCG GGATGGCACC
GATGCAGATA AGAACAACGA CAAGGCTGCG TGCAATGATG CCACCATGCT AACGCCTCTT
TGGGAGAAAG CGAGCGACCT CGTTCAAGAA CTGACTGACA AACGTCGCGA AGAAAAACGT
GGCTGGGAAG AAGGAACGAA AAAGCTCATC GAGCGGCTCC AGAAGAGAGA TCCTCGCTTT
GGGTCTGGAG AGTCGGGGCA AGTGATGATG TGCCCTGAGG ACTTTGAGGC ACAGTTTGAA
TTTATTCTAC TGGGAGATCG GCGCCGACTA TGTGCCCGCA TCATGCATGA CATCGCAGAG
GTCATTGAGT TGGCATGTCC GATGGCAATC AACATTGCAC GTGCAGCCAT CGAAAATCAA
AGGATGCGCA AACATGATGT CAGTGATGCC ACATCACTAT TGGCCTTGGC AAAACATTTC
CTGAATTCCC ATGAGGGGGG AAATCAACCA ATAACAGTCA ATAAGCTCCT TCAACTGGAA
GTCATTGAAT TTTCATTCGA TGACCACGAA GATCTGAAGG AAGACACGCT GATCGAACTA
GTACAGTTGA GCGGCAATTC GGCGAGTCCA ATTGGAGGGC CTGACGCTGC ACGCAGCAAG
CTGCGTGGCC TGCAGCTTGC GCATTTCGCT GCGTTCTATA AGCAATCGTG GCGCGCCAAC
GATTGGATCT ACGGTCGGCT TGACGGTGCT GATCGTTTGA TCAAAGTACT TTTAAATCCT
GAGCGACTGC ATCGATTCTA CTTTGGGCGC TCGGACGAGA TCGCCGAGGA AATCGAGGCG
ATTGCCTTGA GTGACTTGCC CGATGGACCG CTGAAACTCG AGTTGGGATG TCTGTGGAGC
AAGAATGCAT ACCGTGATCG GCTGAAGGGC GAGTTGGCCT TTATCAATGA TATTCAATGC
CCATTGCCAG ACAGCCTGCC TGTCTGCGCG GAAGTGATTA CCCTCCGGCT CCACTATGGC
ATCCTTCGCG AGGAACTGCC GGTTCTCGTG AGCACTATCG TTAGTGACCA GTCGATGGGC
GCCGACAGTG CGAACGCCGG CGAGGCGGTC TTAAAGCTGA TTGGAGCTAA GCCGGGATCG
GTTCAACCTT TTTTGCCAGA GCAGGCGGCA CGATGCCTGA AGAATGGGCT GCTAGGCAGC
GAGACACTGA CCGATGAGGC TGGGTCCGAC CTCTTTACCC GCACGCTTGC TCACACCATG
GCAACGATGC AGAACACGCT CGCCAGCAAG GCGGCGCGGC TCGGCCCAGT CAGCGTCGTA
TTTGCAGCAC TCAAGGTACC GATTATTGGT TTCTATCTTG CAGCGCGTGG CCTGACGCAC
CAATCCCGGA CCAGTGCGAC GCTGAACGGT GCAATCCTCG CGCTAGGCAC TTTCATTGTG
ATGACGGGGA TGGCCGGCCT CCCCGGTCAT ATGCCGCAGT CGGTAGTTAC AGTGGGCTGG
GCGTTGCTTG CCTATGGTTT GATCATGGCG ACGATCCGAC TGCCTAGAAC AGTCGGTTTG
GCGATACTCG TTGCAGGCGC TTATATTGCA TGGCATACGA GCTCTGTCCC CCTGCAATGG
GGCACAGCCA TTGCTGCGCT GCTGGCAATC ACCATCATCA TGCCGTGGCT CCAGTACGTG
ACTGGCTTCC TCATACTCAT ACTTTGTGGC CTGTGGAGCA GCGGGCAACT GCAACCGTTT
ATCCCACTGT CCGGATGCAC CGACTTGACG ATCTACAATC AGACGCTGAG ATATCTGCAT
GTTGATATTT GCATGCCTGT GATGAAGCTG ACAGGGGCTG TCACGCTATC GTTAATGCTT
GCAATCTGGC AAGCCACGCC GTGGGCAAGT AGGTTGGAGA ATTTAGCCAG AGCCGTCATA
TGGAAGTTTG CACTCCAGTT TCGCCGGGCA GCCAGGCGAT AG
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| Protein sequence | MSRENCEELR LALVMNGGVS LAIWMGGVTN EIFRLVKEQH PVYAALLAMT RTVPRVDVIS
GTSAGGINGA ALAISLLYDG EFSELREVWM KTATFNDLLR PPLGKNPGSL LKGDEYFLPG
IRNALQHMAR NRDAARTDLP IDLRLTTTLL SGVQGNTVDD LGTPVHDVDY RAYFHFTNMA
SHGTPSPQSA FDSTNDFDDR TDVLDRLARA ARSTASFPFA FEPSLVGTDG KPSSLKGRFG
DDLKVPRYVV DGGVLDNKPF RGALEAMLQM GRRGSVRRVL AYINPDPGDG PPGQPGATMP
PLSAVLTASL LGIPQSQTIA DQLQEIRSHN DAVRHRRNNV LSLVQNLDAA TLESMAQTLF
PIYRKRRIAD VFESVCEDLQ IEGAPGRLVG KRGREQMRYV FDQGNWSGWI PNDWPSSPDQ
PCNQPESWAW GMFPVEFAAK IMLDLLRITQ NLYDYAYPPE SPAARYAALG ISAPFQLDQW
GNFDMSELSP SLVARLQSTV AAWRHRGKPT VSEDWHRDGT DADKNNDKAA CNDATMLTPL
WEKASDLVQE LTDKRREEKR GWEEGTKKLI ERLQKRDPRF GSGESGQVMM CPEDFEAQFE
FILLGDRRRL CARIMHDIAE VIELACPMAI NIARAAIENQ RMRKHDVSDA TSLLALAKHF
LNSHEGGNQP ITVNKLLQLE VIEFSFDDHE DLKEDTLIEL VQLSGNSASP IGGPDAARSK
LRGLQLAHFA AFYKQSWRAN DWIYGRLDGA DRLIKVLLNP ERLHRFYFGR SDEIAEEIEA
IALSDLPDGP LKLELGCLWS KNAYRDRLKG ELAFINDIQC PLPDSLPVCA EVITLRLHYG
ILREELPVLV STIVSDQSMG ADSANAGEAV LKLIGAKPGS VQPFLPEQAA RCLKNGLLGS
ETLTDEAGSD LFTRTLAHTM ATMQNTLASK AARLGPVSVV FAALKVPIIG FYLAARGLTH
QSRTSATLNG AILALGTFIV MTGMAGLPGH MPQSVVTVGW ALLAYGLIMA TIRLPRTVGL
AILVAGAYIA WHTSSVPLQW GTAIAALLAI TIIMPWLQYV TGFLILILCG LWSSGQLQPF
IPLSGCTDLT IYNQTLRYLH VDICMPVMKL TGAVTLSLML AIWQATPWAS RLENLARAVI
WKFALQFRRA ARR
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