Gene BURPS1710b_1596 details

Gene Information

• Locus tag: BURPS1710b_1596
• Symbol: proP
• ID: 3690476
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 1676950
• End bp: 1678836
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637728052
• Product: putative proline/betaine transporter
• Protein accession: YP_333000
• Protein GI: 76809832
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease
• TIGRFAM ID: [TIGR00883] metabolite-proton symporter

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCTTC TTTCAACAGT CTACGCCTGT CATTTATTTC GGTCACCAGA CCGTTCGGCC 
GCGTGCCGCG ACTGGTCGCC CGGAATTTCG CTCACAAGAA AGCGCGCCTT CGGGCAGCTT 
TTTTCGTTTC GACGCCCTCG AAGGGCATTC AACCGGCCGC GTACGCCACG CGATGCGCCG 
GTTCGCCGAC CGTCCCCATG CGGCGGTCTT TTCTCACGAG TGCAAGCGCG CGACGACCCT 
CGGAGCCGCG CCGATCGGTT TCCGTTATGG ATTAAGCGTT TCATGCGCCC TTTCACGCTC 
GCGACCGACC CTCGTCCGAT CGCGAGCGGC ACTCCCGGCA AACCGTGGCG AACCGCGCCC 
CGTCGCGCGG TTCGGCCGCC GTCACAGGAG TTTTCGACCT TGACTGCAAC ACCCGCCCCC 
TCCAGTTCGT CCAGCGCGCC CACCGAAGGC GCGCTTCCCG CCGCTGCGCA CGAGATCACC 
GTCGTCGATC AGGGCCTGCT CAAGCGCGCC GTCGGCGCGA TGGCGCTCGG CAACGCGATG 
GAATGGTTCG ACTTCGGCGT CTACAGCTAC ATCGCCGTCA CGCTCGGCCA GGTGTTCTTC 
CCGTCGAGCA GCCCGTCCGC GCAGTTGCTC GCGACGTTCG GCACGTTCGC CGCCGCCTTC 
CTCGTGCGCC CGCTCGGCGG GATGGTGTTC GGGCCGCTCG GCGATCGCAT CGGCCGCCAG 
CGCGTGCTCG CGATGACGAT GATCATGATG GCGGTCGGCA CGTTCGCGAT CGGCCTGATC 
CCGAGCTACG ACTCGATCGG CCTCCTCGCG CCCGTGCTGC TCCTCGTCGC GCGTCTCGTG 
CAAGGCTTCT CGACGGGCGG CGAGTACGGC GGCGCGGCAA CCTTCATCGC CGAGTTCTCG 
ACCGACAAGC GCCGCGGCTT CATGGGCAGC TTCCTCGAGT TCGGCACGCT GATCGGCTAT 
GTGATGGGCG CGGGCGTCGT CGCGCTGCTG ACGGCTTCGC TGTCGCACGA CGCGCTGCTG 
TCGTGGGGCT GGCGCGTGCC GTTCCTGATC GCCGGCCCGC TCGGCCTGAT CGGCCTGTAC 
ATCCGGATGA GGCTCGAGGA AACGCCCGCG TTCAAGCGGC AGGCCGAAGC GCGCGAAGCG 
CAGGACAAGG CCGTGCCGAA GGCGCATTTC CGCCGACAGC TCGCGCGGCA CTGGCGCGCG 
CTGCTGCTGT GCGTCGGCCT CGTGCTGATC TTCAACGTCA CCGATTACAT GGCGCTGTCG 
TACCTGCCGA GCTATCTGTC GTCGACGCTG CACTTCGACG AGGCGCACGG CCTCGTGCTG 
ATCCTGATCG TGATGGTGCT GATGATGCCG ATGACGCTCG CCACGGGCCG CCTGTCGGAC 
GCCGTCGGCC GCAAGCCGGT GATGCTCGCC GGCTGCGTCG GGCTCTTCGC GCTCGCGATT 
CCCGCGCTGC TCCTGATCCG CACCGGCGAG ACGGCGCTCG TGTTCGGCGG CCTGCTGATC 
CTCGGCGCAC TGCTGTCGTG CTTCACGGGC GTGATGCCGT CGGCGCTGCC CGCGCTCTTT 
CCGACCGAGA TCCGCTACGG CGCGCTCGCG ATCGGCTTCA ACGTGTCGGT GTCGCTGTTC 
GGCGGCACGA CGCCGCTCGC CGCCGCGTGG CTCGTCGACG CGACGGGCAA CCTGATGATG 
CCCGCGTACT ACCTGATGGG CGCGGCCGTG ATCGGCGCGA TCTCGGTGCT CGCGCTGCCC 
GAGAGCGCGC GCCAGCCGCT CAAGGGCTCG CCGCCCGCCG TCGCGTCGCA CCGCGAGGCA 
CACGCGCTCG CGCGCGAGAT CAAGCGCCGC GAGGCGGCCG AGCGCGACGA CAGCGGCTAC 
CCGTCGGCCG CGGCGTTGCG CGCGTGA 

 

Protein sequence

MSLLSTVYAC HLFRSPDRSA ACRDWSPGIS LTRKRAFGQL FSFRRPRRAF NRPRTPRDAP 
VRRPSPCGGL FSRVQARDDP RSRADRFPLW IKRFMRPFTL ATDPRPIASG TPGKPWRTAP 
RRAVRPPSQE FSTLTATPAP SSSSSAPTEG ALPAAAHEIT VVDQGLLKRA VGAMALGNAM 
EWFDFGVYSY IAVTLGQVFF PSSSPSAQLL ATFGTFAAAF LVRPLGGMVF GPLGDRIGRQ 
RVLAMTMIMM AVGTFAIGLI PSYDSIGLLA PVLLLVARLV QGFSTGGEYG GAATFIAEFS 
TDKRRGFMGS FLEFGTLIGY VMGAGVVALL TASLSHDALL SWGWRVPFLI AGPLGLIGLY 
IRMRLEETPA FKRQAEAREA QDKAVPKAHF RRQLARHWRA LLLCVGLVLI FNVTDYMALS 
YLPSYLSSTL HFDEAHGLVL ILIVMVLMMP MTLATGRLSD AVGRKPVMLA GCVGLFALAI 
PALLLIRTGE TALVFGGLLI LGALLSCFTG VMPSALPALF PTEIRYGALA IGFNVSVSLF 
GGTTPLAAAW LVDATGNLMM PAYYLMGAAV IGAISVLALP ESARQPLKGS PPAVASHREA 
HALAREIKRR EAAERDDSGY PSAAALRA