Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1565 |
Symbol | |
ID | 3691253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1649719 |
End bp | 1650492 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637728021 |
Product | short chain dehydrogenase |
Protein accession | YP_332969 |
Protein GI | 76810124 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGACC ACAGCATCAA GGGCAAGACC GTGATCATCG CGGGCGGCGC GAAGAACCTC GGCGGGCTGA TCGCGCGCGA TCTCGCCGCG CAGGGCGCGC AGGCGGTGGC GATTCACTAC AACAGCGCGG CGTCGAAGGG CGCCGCCGCC GAAACCGTGG CGGCGATCGA GGCGGCCGGC GCGCGAGCGG TCGCGCTGCA GGCCGACCTG ACGGCGGCGG GCGCCGTCGA GAAACTGTTC GTCGACACGG TGGCCGCGAT CGGCCGGCCG GACATCGCGA TCAATACCGT CGGCAAGGTG CTGAAGAAGC CGTTCGTCGA GATCACCGAG GCCGAATACG ACGAGATGGC CGCCGTCAAT TCGAAGACGG CGTTCTTCTT CCTCAAGGAA GCCGGCAGGC ACGTGAACGA CAACGGCAAG ATCGTCACGC TCGTCACGTC GCTGCTGGGC GCGTTCACGC CGTTCTACGC GGCCTACGCG GGGATGAAGG CGCCCGTCGA GCACTTCACG CGCGCGGCGG CGAAGGAGTT CGGCGCGCGC GGCATTTCGG TGACGGCGGT GGGCCCGGGC CCGATGGATA CGCCGTTCTT CTATCCGGCC GAAGGCGCGG ACGCGGTGGC GTATCACAAG ACGGCCGCGG CGCTGTCGCC GTTCTCGAAG ACGGGGCTGA CCGACATCGG GGACGTCGTG CCGTTCATCC GCCATCTCGT CAGCGACGGC TGGTGGATCA CCGGCCAGAC GATTCTGATC AACGGCGGTT ATACGACGAA GTAA
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Protein sequence | MADHSIKGKT VIIAGGAKNL GGLIARDLAA QGAQAVAIHY NSAASKGAAA ETVAAIEAAG ARAVALQADL TAAGAVEKLF VDTVAAIGRP DIAINTVGKV LKKPFVEITE AEYDEMAAVN SKTAFFFLKE AGRHVNDNGK IVTLVTSLLG AFTPFYAAYA GMKAPVEHFT RAAAKEFGAR GISVTAVGPG PMDTPFFYPA EGADAVAYHK TAAALSPFSK TGLTDIGDVV PFIRHLVSDG WWITGQTILI NGGYTTK
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