| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1516 |
|---|
| Symbol | |
|---|
| ID | 3688706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 1595426 |
|---|
| End bp | 1596790 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637727972 |
|---|
| Product | amino acid permease |
|---|
| Protein accession | YP_332920 |
|---|
| Protein GI | 76811725 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAACT TGCAGCGCCA TCTGAGCGCG CGGCACATCC GCTTTCTCGC GCTCGGCTCG
GCGATCGGCA CGGGCCTCTT CTACGGCTCG GCGTCCGCGA TCCGGCTGGC GGGCCCCGCC
GTCATCCTCG CTTACATCGT CGGCGGCGCG GCCGTCTACA TGGTGATGCG CGCGCTCGGC
GAAATGGCGG TGCGCGAGCC CGTGCCGGGC TCGTTCGGCC ACTACGCGAC CGAGAACCTC
GGCCCGTTCG CGGGCTTCGT CACCGGCTGG ACCTACACGC TCGAGATGGT GATCGTCGCG
ATCGCCGACA TCACCGCGTT CGGCATCTAC ATGGGCTTCT GGTTTCCGCA CGTCCCGCAG
TGGATCTGGG TGCTCGCGAT CGTCGCGATC ATCTGCGGGC TGAACCTCTG CCACGTGAAG
GTGTTCGGCG AGCTGGAGTT CTGGCTGTCG ATCGTCAAGG TCGGCGCGAT CGTCGCGATG
ATCGGCGGCG GCGCGGCGAT CCTCTTCACC GGGATGAGGC TCGGCAGCGG CGGCGCGCCG
TCGCTCGCGA ACCTGTGGTC GCACGGCGGC TTCCTGCCGA ACGGCGTGGG CGGCCTCGTC
GCGTCGCTGT CGGTCGTGAT CTTCGCGTAC GGCGGCATCG AAGTGATCGG CATGAGCGCC
GGCGAGGCGA AGGAGCCCGA GCGCGCGATC CCGCGCGCGA TCAACGCGGT GCCGATGCGC
ATCCTGCTCT TCTACGTGCT GACGATGATC GTGCTGATGT CGATCTTTCC GTGGACGGGC
GTCGGCGCGA ACGGCAGCCC GTTCGTGCAG ATCTTCTCGG CGCTCGGCGT GCGCTCCGCG
GCCGAGATCC TGAACCTCGT CGTGATCAGC GCCGCGATCT CCGCGATCAA CAGCGACATC
TTCGGCGCGG GCCGAATGAT GTACGCAATG GCGCTGCAGG GCCAGGCGCC GCGCGCGCTC
GCCGCGATGT CCGCGCGCGG CGTGCCGTGG GTCACGGTGC TCGTGATGGC GGGCGCGCTG
CTCGTCGGCG TCGTGCTCAA CTATCTGATG CCGAAGGACG TGTTCCTGAT GGTCGCCGCG
AGCGCGACGT TCGCGACCGT GTGGGTCTGG CTGATGATCC TGCTGTCGCA GGTCGCGATG
CGCCGCCGGC TCGGCGCGGC CGAGGTCGCC GCGCTGAAGT TCAAGGTGCC GTTCTGGCCC
GTCGGCCCCG CGCTCACGAT CGCGTTCATG GCGTTCGTGA TCGCGATGCT CGGCTACTTC
GACGATACGC GCGTCGCGCT CTTCGTCGGC GCCGCGTGGC TCGCGATCCT CGCGCTCGTG
TTCTACACAC GGATCCGGCC GCGGCTCGCC GCCGTCGCGC GCTGA
|
|---|
| Protein sequence | MKNLQRHLSA RHIRFLALGS AIGTGLFYGS ASAIRLAGPA VILAYIVGGA AVYMVMRALG
EMAVREPVPG SFGHYATENL GPFAGFVTGW TYTLEMVIVA IADITAFGIY MGFWFPHVPQ
WIWVLAIVAI ICGLNLCHVK VFGELEFWLS IVKVGAIVAM IGGGAAILFT GMRLGSGGAP
SLANLWSHGG FLPNGVGGLV ASLSVVIFAY GGIEVIGMSA GEAKEPERAI PRAINAVPMR
ILLFYVLTMI VLMSIFPWTG VGANGSPFVQ IFSALGVRSA AEILNLVVIS AAISAINSDI
FGAGRMMYAM ALQGQAPRAL AAMSARGVPW VTVLVMAGAL LVGVVLNYLM PKDVFLMVAA
SATFATVWVW LMILLSQVAM RRRLGAAEVA ALKFKVPFWP VGPALTIAFM AFVIAMLGYF
DDTRVALFVG AAWLAILALV FYTRIRPRLA AVAR
|
|---|
| |