Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1500 |
Symbol | |
ID | 3689685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 1578623 |
End bp | 1581733 |
Gene Length | 3111 bp |
Protein Length | 1036 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637727956 |
Product | AcrB/AcrD/AcrF family protein |
Protein accession | YP_332904 |
Protein GI | 76808728 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCGT CCCGCGTCTT CATTCTCCGG CCGGTCGGCA CCGCGCTCCT GATGGCGGCG ATCATGCTCG CCGGCCTCGT CGCGCTGCGC TTCCTGCCGC TCGCGGCGCT GCCCGAAGTC GACTATCCGA CGATCCAGGT CCAGACCTTC TATCCGGGCG CGAGCCCCGA GGTGATGACG TCGTCCGTCA CCGCGCCGCT CGAGCGTCAG TTCGGGCAGA TGCCGTCGCT CAACCAGATG TCGTCGCAAA GCTCGGCGGG CGCGTCGGTG ATCACGCTGC AGTTCAGCCT CGATCTGCCG CTCGACATCG CCGAGCAGGA AGTGCAGGCG GCCATCAACG CGGCGGGCAA CCTGCTGCCG TCGGACCTGC CCGCGCCGCC CATCTACGCG AAGGTCAACC CGGCCGACGC GCCCGTGATC ACGCTCGCCG TCACGTCGAA GACGCTGCCG CTCACGCAGG TGCAGGATCT CGCGGACACG CGCCTCGCGA TGAAGATCTC GCAGGTGTCG GGCGTCGGCC TCGTCAGCCT GTCGGGCGGC AACCGGCCGG CCGTGCGGAT CCAGGCGAAC CCGCTCGCGC TCGCGTCGTA CGGCCTGAAC CTCGACGATC TGCGCACGAC GATCTCGAAC CTGAACGTCA ACACGCCGAA GGGCAACTTC GACGGCCCGA CGCGCGCGTA CACGATCAAC GCGAACGATC AGCTGACGAG CGCCGACCAG TACAACGACG CCGTCGTCGC GTACAAGAAC GGCCGGCCGG TGATGCTCAC CGATGTCGCG AAGATCGTCG CCGGCTCGGA GAACACGAAG CTCGGCGCGT GGGTCGACGC CGAGCCCGCG ATCATCCTGA ACGTGCAGCG GCAGCCGGGC GCGAACGTGA TTCAAACGGT CGACAACGTC AAGGCGATCC TGCCGAAGCT GCAGGAATCG CTGCCCGCCG CGCTCGACGT GCAGATCGTC ACCGATCGCA CGACGATGAT CCGCGCCGCC GTGCGCGACG TGCAGTTCGA GCTCGGGCTC GCGGTCGCGC TCGTCGTGCT CGTCATGTAC CTGTTCCTCG CGAACGTCTA CGCGACGATC ATCCCGAGCC TGTCGGTGCC GCTGTCGCTG ATCGGCACGC TCGCGGTGAT GTACCTGTCG GGCTTTTCGC TGAACAACCT GTCGCTGATG GCGCTCACGA TCGCCACGGG CTTCGTCGTC GACGACGCGA TCGTGATGAT CGAGAACATC GCGCGCTACG TCGAGGAAGG CGACTCCGCG CTCGAAGCGG CGTTAAAGGG CTCCAAGCAG ATCGGCTTCA CGATCATCTC GCTCACCGTG TCGCTGATCG CCGTGCTGAT TCCGCTGCTG TTCATGGGCG ACGTCGTCGG GCGGCTGTTC CACGAGTTCG CGATCACGCT CGCGGTGACG ATCGTGATCT CGGCTGTCGT GTCGCTCACG CTCGTGCCGA TGATGTGCGC GAAGCTGCTG CGCCACACGC CGCCGCCCGA GAGCCACCGC TTCGAGGCGA AGGTGCACGG GCTGATCGAG CGCGTGATCG AGCGCTACGG CGTCGCGCTG CAATGGGTGC TCGACCGGCA GCGCGCGACG CTCGTCGTCG CGGTGCTCAC GCTCGCGCTC ACCGCGCTGC TCTACGTCGT GATTCCGAAG GGCTTCTTCC CGACGCAGGA CACGGGCGTG ATCCAGGCGA TCACGCAGGC GCCGCAATCG GTGTCGTACG GCGCGATGGC CGAGCGGCAG CAGGCGCTCG CCGCCGAGAT CCTGAAGCAT CCGGACGTCG TGAGCCTCAC GTCGTTCATC GGCGTCGACG GCGCGAACAT CACGCTCAAC AGCGGCCGCA TGCTGATCAA CCTGAAGCCG CGCGACGAGC GCAGCGAATC GGCGAGCGAC GTGATCCGCT CGCTGCAGCG GCAGGTCGCG AACGTCACGG GCATCTCGCT GTACATGCAG CCGGTGCAGG ATCTGACGAT CGACTCGACG GTCAGCCCGA CGCAATATCA GTTCATGCTG ACGAGCCCGA ATCCGGACGA GTTCGCGACC TGGGTGCCGA AGCTCGTCGA CCGGCTGAGG AAGGAGCCCT CGCTCGCCGA CGTCGCCACC GATCTGCAGA ACAGCGGCAA GTCGGTCTAC ATCGAGATCG ACCGCACGAG CGCCGCGCGC TTCGGGATCA CGCCGGCGAC CGTCGACAAC GCGCTCTACG ACGCGTACGG CCAGCGGATC GTGTCGACGA TCTTCACGCA GTCGAACCAG TACCGCGTGA TCCTCGAATC GGAACCGCAG ATGCAGCACT ACACCGATTC GCTCAACGGC ATCTACCTGC CGTCGGCGGG CGGCGGGCAG GTGCCGCTGT CCGCGATCGC GACGTTCCAC GAGCGGCCCG CGCCGCTGCT CGTGTCGCAC CTGTCGCAGT TCCCGGCCAC GACGATCTCG TTTAACCTCG CGCCGGGCGC GTCGCTCGGC GAGGCGGTGA AGGCGATCGA CGCGGCCGAG CGCGAGCTCG GGCTGCCGGC GTCGTTCCAG ACGCGCTTCC AGGGCGCGGC GCTCGCGTTC CAGGCATCGC TGTCGAACCA GCTGTTCCTG ATCCTCGCCG CGATCGTCAC GATGTACATC GTGCTCGGCG TGCTGTACGA GAGCTACATC CATCCGATCA CGATCCTCTC GACGCTGCCG TCGGCGGGTG TCGGCGCGCT GCTCGCGCTG ATGATCACCG GGCACGATCT CGACATCATC GGGATCATCG GCATCGTGCT GCTCATCGGC ATCGTGAAGA AGAACGCGAT CATGATGATC GACTTCGCGC TCGAGGCCGA GCGCGTCGAG GGCAAGCCGC CGCGCGAGGC GATCTACCAG GCGTGCCTGC TGCGCTTCCG GCCGATCCTG ATGACGACGC TCGCCGCGCT GCTCGGCGCC GTGCCGCTCA TCGTCGGCTC GGGCGCGGGC TCCGAGCTGC GCCAGCCGCT CGGCATCGCG ATCGCGGGCG GGCTCATCGT GTCGCAGGTG CTCACGCTCT TCACGACGCC CGTGATCTAT CTCGGCTTCG ATGCGCTCGC CCGCCGCGTG CGCGGCTTCT TCGAGCGCTC CGGCGGCCCG GCCGCGCATC CGGACGCGTA A
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Protein sequence | MNPSRVFILR PVGTALLMAA IMLAGLVALR FLPLAALPEV DYPTIQVQTF YPGASPEVMT SSVTAPLERQ FGQMPSLNQM SSQSSAGASV ITLQFSLDLP LDIAEQEVQA AINAAGNLLP SDLPAPPIYA KVNPADAPVI TLAVTSKTLP LTQVQDLADT RLAMKISQVS GVGLVSLSGG NRPAVRIQAN PLALASYGLN LDDLRTTISN LNVNTPKGNF DGPTRAYTIN ANDQLTSADQ YNDAVVAYKN GRPVMLTDVA KIVAGSENTK LGAWVDAEPA IILNVQRQPG ANVIQTVDNV KAILPKLQES LPAALDVQIV TDRTTMIRAA VRDVQFELGL AVALVVLVMY LFLANVYATI IPSLSVPLSL IGTLAVMYLS GFSLNNLSLM ALTIATGFVV DDAIVMIENI ARYVEEGDSA LEAALKGSKQ IGFTIISLTV SLIAVLIPLL FMGDVVGRLF HEFAITLAVT IVISAVVSLT LVPMMCAKLL RHTPPPESHR FEAKVHGLIE RVIERYGVAL QWVLDRQRAT LVVAVLTLAL TALLYVVIPK GFFPTQDTGV IQAITQAPQS VSYGAMAERQ QALAAEILKH PDVVSLTSFI GVDGANITLN SGRMLINLKP RDERSESASD VIRSLQRQVA NVTGISLYMQ PVQDLTIDST VSPTQYQFML TSPNPDEFAT WVPKLVDRLR KEPSLADVAT DLQNSGKSVY IEIDRTSAAR FGITPATVDN ALYDAYGQRI VSTIFTQSNQ YRVILESEPQ MQHYTDSLNG IYLPSAGGGQ VPLSAIATFH ERPAPLLVSH LSQFPATTIS FNLAPGASLG EAVKAIDAAE RELGLPASFQ TRFQGAALAF QASLSNQLFL ILAAIVTMYI VLGVLYESYI HPITILSTLP SAGVGALLAL MITGHDLDII GIIGIVLLIG IVKKNAIMMI DFALEAERVE GKPPREAIYQ ACLLRFRPIL MTTLAALLGA VPLIVGSGAG SELRQPLGIA IAGGLIVSQV LTLFTTPVIY LGFDALARRV RGFFERSGGP AAHPDA
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