| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1400 |
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| Symbol | |
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| ID | 3688245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 1472667 |
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| End bp | 1475993 |
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| Gene Length | 3327 bp |
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| Protein Length | 1108 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637727856 |
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| Product | putative permease |
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| Protein accession | YP_332810 |
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| Protein GI | 76810019 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCCGCT TCGCCCGAGC CCGGGCGCGG CCCGCCCTCG AACCGCGCGC ATTGCGCAAG
GAGGCGGCAC ATGGTCGAAG CCATTTCGCT CGGCGCGGGG CTCGCGTGGG CGAGCGGCCT
GCGCCTCTAT CTCACCGTGC TGATCGCGGG CGTGTTCGCG CGCGCCGGCT TCATTCACCT
GCCCGACACG CTCGCGGTGC TCACGTCGCC GTGGGTGATC GGCTCGGCCG CCGTGCTCGC
GGTCGCCGAG TTCCTCGCCG ACAAGGTTCC CGCGTTCGAT TCGCTGTGGG ACGCCGTCCA
CACGTTCATC CGGATTCCCG CGGGCGCGGT GCTCGCGGCG GCGTCGCTCG GCCACGCCGA
TCCCGCGCTC CTCGTCGTCG CGGGCCTCGC GGGCGGCACG CTCGCCGGTT CCGCGCATAT
CGCGAAGGCG GGCACGCGCG CACTCATCAA TCTGTCGCCG GAACCGATCT CGAACTGGAT
CGCGTCGACG ACGGAGGACG GGCTCACGGT CGGCGGCCTC GTGCTCGCAT TCTTCGTGCC
GCTGCTGTTC CTCGCGCTGA TGATCGGCTT TCTCGCGTTT TCCGCGTGGG CGTTGCCGCG
CCTCTGGCGC GGCGTGTCGG GCGGCTTTCG CGGGATGGCG AACCACATGG TGTCGCGGCT
GAATTCGATC GGGAGCAAGC GCGATTGACG GCGGCGGGCA AAGCGAGGCC GGCCGGCCGC
CGTTTCGGCC TCGTCGATCT GCTGCGGCAG GCCGGGCGGA TGACGCTGCG CGACTGGCGC
GCGGGCGAGT TGACGCTCGT CGCGCTCGCG CTCGTGCTTG CCGTCGCGGC GCTCACGAGC
GTCGGCTTTC TCGCCGATAG GCTGCGCCAG GGGCTCGAGC GCGACGCACG CCGGATGCTC
GGCGCGGATT TCGTCGTGCG GGCCGATCAT CCGGTCGATC CGGCGTTCGC GCACGAGGCG
CGAACGCTCG GCCTCGCGAC CGCGACGACC GCGGTCTTTC CCAGCATGGT GGGCGCGGCC
AAGCCGGCCG ATTCAGCCGA TTCAGCCGGT TCAGCCAAGG CCGGCACGCC CGCGCCGTCC
GCCGCGGCGG ACGGCGCGGG CAGCTCGCCG CCCGTGCGGC TCGCGGCCGT GAAGGCGGTG
TCGGCCGGCT ATCCGCTGCG CGGCGCGGTC GAGATCGCGC CCGAGGCGAA CGCGCCCGGC
CGCGCCGCCG GCTCGATTCC AGCCTCGGGC ACGGTGTGGG TCGATCCGTC GCTGCTCGAC
GCGCTCCATT TGAAGGTCGG CGACGCGCTG CGCGTCGGCG GCCGCACGTT CACGATCGGC
GCGGCGATCA CCCGCGAGCT CGACCGCGGC TTCTCGTTCG TCAATTTCTC GCCGCGCGTG
ATGCTGCGCG CGGACGAGCT CGAATCGACG GGGCTCACGG GCTACGGCAG CCGCGTCACG
TACCGGCTCC TCGTCGCGGG CGACGATGCG GCCGTCGAGC GCTTCGCGCG CTACGCGCAT
GCGCGCGTCG ACGGCGGCAA GCTGCGCGGC GTCGCGCTCG AATCGCTGCA GGAAGGCCAG
CCGCAGGTGC GGCAGACGCT CGACCGCGCG CGCCATTTCC TCACGCTCGT CGCGCTGTTG
ACCGCGCTGC TCGCGGCCGT CGCGATCGCG ATGGCCGCGC AGCGCTACAT GCGCCGCCAT
CTCGACGGCT GCGCGGCGAT GCGCTGCCTC GGCGCGAGCC GGCGCACGCT GTCGGCGCTG
TTCGCGATCG AATTCGCGCT GCTCGGGCTC GCGGGCGGCG CGGCGGGCGC GGCGCTCGGC
TACGTCGGCC ATCTCGTGCT GCTGCGCGCG CTCGGCAGCC TGATCGACGT CGTGCTGCCG
CCGCCTTCGG CATGGCCGGC GGCGATCGGC GTCGGAACCG GGCTCGTGCT GCTGCTCGGC
TTCGCGCTGC CGCCGCTCGC GCCGTTGACG CGCGTGCCGC CGGTGCGCGT GCTGCGCCGC
GAATGGGGCG ACGCCGGCCG CGTCGCGTGG GTCGGCTACG CGATGGGCAT CGCGCTCTTC
GCGGCGCTGT TGATCGCGGC GGCGGGCAAC CTGACGCTCG GCGCGATCGT CGCGGGCGGC
TTCGCGGGCA GCCTCGTGCT GTTCGCGCTC ATCGCGCGGC TCGCGCTCGT CGCGCTCGCG
CGGCTCGTGC GCGACGGCCG CGTCGCGGCG GGGCTCGGCT GGCGCCACGC GCTCGCGTCG
CTCGAGCGGC GCGGCGCGGC GAGCGCGCTG CAGATCACCG CGCTCGCGCT CGGTCTGATG
TGCCTGCTGC TCATCGCGAT CACGCGCAAC GATCTCGTCG CCGGCTGGCG GCAGTCGACG
CCGCCCGACG CGCCGAACCA GTTCCTGATC GACATCCAGC CCGACCAGCG CGACGACGTC
GTCCGCTATC TCGCGGCGAA CGGCATCGCC GATCCGGCGC TGTCGCCGAT GGTGCGCGGG
CGGCTCGTCG CGGTGAACGG CAAGCCGGTG AATCCGGACG ACTACAAGCG CGACGACGCG
CGCCGCCTCG TCGACCGCGA GTTCAACCTC TCGTACACGA CACGGCTGCC CGAGGACAAC
CGGCTCGTCG CGGGCGACTG GTTCGGCGCG TCGGGCGTGC CGCAGATCTC GATCGAGGCG
GGGCTCGCGA AGACGCTGGG CGTGAAAACG GGCGACACGC TGCGTTTCGA CGTGACGGGC
CTCACCGTCG ACGCGCCGGT GACGAGCGTG CGCAAGCTCG ATTGGGGCAC GTTCCGCGTG
AACTTCTTCG TGCTGATGCC GCCCGCGGCG CTGCGCGATT TTCCGGCCAC CTACATCACG
AGCTTCCATT TGCCCGCCGC GCGCGAGCGC GTGCTCGACG GCCTGATCGC ACGCTACCCG
AACCTGACGG CGATCGACGT CGGCCCGATC CTCGCGCAGC TCGAGCGCGT GCTGCTGCAG
GTGATCGGCG CGGTGCAGTT CCTGTTCGGC TTCACGCTCG CGGCGGGTGT GCTCGTGCTG
TATACGGCGC TTGCCGGCTC GCGCGACGAG CGCGTGCGCG AGGCCGCGCT GATGCGCGCG
CTCGGCGCGT CGCGCAAGCA GGTCGTCGCC GTGCAGCGCG CGGAGTTCGT CGTCGTCGGC
GTGCTCGCGG GCGCGATGGC GGCGGCGGGC GCGCTTGTGG TCGGCGCGGT GCTCGCGTCG
CGCGTGTTCG ATTTCCAGCT CGCGCCCGAC CCGTGGCTCG TACCGGCCGG CATCGCGGCG
GGCGTCGCGT GCGCGGGCGC GGCGGGGTGG CTCGGCCTGC GCGGCGTGCT GCGCCGGCCG
GCGCTGCAAT CGCTGCGCGA TGCATGA
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| Protein sequence | MGRFARARAR PALEPRALRK EAAHGRSHFA RRGARVGERP APLSHRADRG RVRARRLHSP
ARHARGAHVA VGDRLGRRAR GRRVPRRQGS RVRFAVGRRP HVHPDSRGRG ARGGVARPRR
SRAPRRRGPR GRHARRFRAY REGGHARTHQ SVAGTDLELD RVDDGGRAHG RRPRARILRA
AAVPRADDRL SRVFRVGVAA PLARRVGRLS RDGEPHGVAA EFDREQARLT AAGKARPAGR
RFGLVDLLRQ AGRMTLRDWR AGELTLVALA LVLAVAALTS VGFLADRLRQ GLERDARRML
GADFVVRADH PVDPAFAHEA RTLGLATATT AVFPSMVGAA KPADSADSAG SAKAGTPAPS
AAADGAGSSP PVRLAAVKAV SAGYPLRGAV EIAPEANAPG RAAGSIPASG TVWVDPSLLD
ALHLKVGDAL RVGGRTFTIG AAITRELDRG FSFVNFSPRV MLRADELEST GLTGYGSRVT
YRLLVAGDDA AVERFARYAH ARVDGGKLRG VALESLQEGQ PQVRQTLDRA RHFLTLVALL
TALLAAVAIA MAAQRYMRRH LDGCAAMRCL GASRRTLSAL FAIEFALLGL AGGAAGAALG
YVGHLVLLRA LGSLIDVVLP PPSAWPAAIG VGTGLVLLLG FALPPLAPLT RVPPVRVLRR
EWGDAGRVAW VGYAMGIALF AALLIAAAGN LTLGAIVAGG FAGSLVLFAL IARLALVALA
RLVRDGRVAA GLGWRHALAS LERRGAASAL QITALALGLM CLLLIAITRN DLVAGWRQST
PPDAPNQFLI DIQPDQRDDV VRYLAANGIA DPALSPMVRG RLVAVNGKPV NPDDYKRDDA
RRLVDREFNL SYTTRLPEDN RLVAGDWFGA SGVPQISIEA GLAKTLGVKT GDTLRFDVTG
LTVDAPVTSV RKLDWGTFRV NFFVLMPPAA LRDFPATYIT SFHLPAARER VLDGLIARYP
NLTAIDVGPI LAQLERVLLQ VIGAVQFLFG FTLAAGVLVL YTALAGSRDE RVREAALMRA
LGASRKQVVA VQRAEFVVVG VLAGAMAAAG ALVVGAVLAS RVFDFQLAPD PWLVPAGIAA
GVACAGAAGW LGLRGVLRRP ALQSLRDA
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