| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1377 |
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| Symbol | cafA |
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| ID | 3690101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 1450443 |
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| End bp | 1451909 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637727833 |
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| Product | ribonuclease G |
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| Protein accession | YP_332787 |
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| Protein GI | 76811448 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.231093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAG AGATCCTGAT CAACATCACG CCGCAGGAAA CGCGGGTCGC GCTCGTCCAA
CAAGGCGCGG TGCAGGAGCT TCACGTCGAG CGCACGCTGT CGCGCGGACG CGTCGGCAAC
GTCTATCTCG GCAAGGTCGT GCGCGTGCTG CCCGGCATGC AGTCGGCGTT CATCGACATC
GGGCTCGAGC GCGCGGCGTT CCTGCACGTC GCCGACATCT GGCAGCCGCG CGCGGGCGAC
GCGCCCGCCG CCGCGACGCA CCAGCCGATC GAGAAAATCG TGTTCGAGGG CCAGACGCTG
ATGGTCCAGG TGATCAAGGA CCCGATCGGC ACGAAGGGCG CGCGGCTGTC GACGCAGATC
AGCATCGCGG GGCGCACGCT CGTCTACCTG CCGCAGGAGC CGCACATCGG CATCTCGCAG
AAGATCGAGA GCGAGGCCGA GCGCGAGGCG GTGCGTGCGC GGCTGACCGC GGTGATCCCG
TCCGACGAGA AAGGCGGCTA CATCGTGCGC ACGATCGCCG AGGACGCGAC CTCCGACGAG
CTCGCCGCCG ACGTCGCGTA CCTGCGCAAG ACGTGGGCGA CGATCGTCGC GCAGGGCCAG
CGCGTGCCGC CGACGAGCCT GCTGTATCAG GATCTCGATC TCGCGCAGCG CGTGCTGCGC
GATTTCGCGA ACGACGACAC GACGCGCATC CAGGTCGATT CGCGCGAGAC ACACCAGCGG
CTCGTCGAGT TCGCGGCCGA GTTCACGCCG GCCGTCAGCC CGAAGCTGCA CCACTACACC
GGCGAGCGGC CGCTGTTCGA TCTGTACAAC ATCGAAGCCG AAATCCAGCG CGCGCTGTCG
CGTCGCGTCG ATCTGAAATC GGGCGGCTAC CTGATGATCG ATCAGACCGA GGCGATGACG
ACGATCGACG TGAACACGGG CGGCTACGTC GGCGCGCGCA ATTTCGACGA TACGATCTTC
AAGACGAATC TCGAGGCGGC GCACACGATC GCGCGGCAGC TTCGGCTGCG CAATCTCGGC
GGGATCATCA TCATCGATTT CATCGACATG GAGAACGCCG AGCATCGCGA CGCGGTGCTC
GCCGAGCTGA AGAAGGCGCT CTCGCGCGAC CGCACCCGCG TGACGGTGAA CACCTTCTCG
CAGTTGGGGC TCGTCGAGAT GACGCGCAAG CGCACGCGCG AATCGCTCGC GCACGTGCTG
TGCGAGCCTT GCCCGACGTG CCAGGGCAAG GGCCAGGTGA AGACATCGCG CACCGTGTGC
TACGACATCC TGCGCGAGAT CCTGCGCGAG TCGCGACAAT TCAATCCGCG CGAGTTTCGC
GTGATCGCGT CGCAGCAGGT GATCGACCTC TTTCTCGACG AGGAGTCGCA GCATCTCGCG
ATGCTGATCG ACTTCATCGG CAAACCGGTG TCGTTGCAGG TCGAGTCGAA CCTGAGCCAG
GAGCAGTACG ACATCGTCTT GATGTGA
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| Protein sequence | MNEEILINIT PQETRVALVQ QGAVQELHVE RTLSRGRVGN VYLGKVVRVL PGMQSAFIDI
GLERAAFLHV ADIWQPRAGD APAAATHQPI EKIVFEGQTL MVQVIKDPIG TKGARLSTQI
SIAGRTLVYL PQEPHIGISQ KIESEAEREA VRARLTAVIP SDEKGGYIVR TIAEDATSDE
LAADVAYLRK TWATIVAQGQ RVPPTSLLYQ DLDLAQRVLR DFANDDTTRI QVDSRETHQR
LVEFAAEFTP AVSPKLHHYT GERPLFDLYN IEAEIQRALS RRVDLKSGGY LMIDQTEAMT
TIDVNTGGYV GARNFDDTIF KTNLEAAHTI ARQLRLRNLG GIIIIDFIDM ENAEHRDAVL
AELKKALSRD RTRVTVNTFS QLGLVEMTRK RTRESLAHVL CEPCPTCQGK GQVKTSRTVC
YDILREILRE SRQFNPREFR VIASQQVIDL FLDEESQHLA MLIDFIGKPV SLQVESNLSQ
EQYDIVLM
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