| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1369 |
|---|
| Symbol | |
|---|
| ID | 3688663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 1441475 |
|---|
| End bp | 1441927 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637727826 |
|---|
| Product | carboxymuconolactone decarboxylase family protein |
|---|
| Protein accession | YP_332780 |
|---|
| Protein GI | 76810532 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACACG CCCCCCGCCT TCCGTATCCG AAACTCGCAT CGAAGCCGTT CAACGCGCTG
CTCCATCTGT CCGAAACCGT GTGGGGCGGC TCGCTCGGCA AGCCACTCGT CGATCTGGTG
TTTCTGCGCG TCTCGCAGAT CAACGGCTGC GCGTACTGCA TCGACATGCA CTGGCGCGAT
CTCGTGAAGC TCGGCGTCAA CGAGCGGCAT CTGAACGCGG TCGCCGGCTG GCGCGAGGCG
CCCTTCTTCG ACGCCCGCGA GCGCGCCGCG CTGCAATGGG CGGAAAGCGT CGCGCGGATT
CCGCACACGG ACCCGAGCGA CGAAGCGTTC GCGCATTTGC AGGCGCATTT TTCCGACGCG
GAAATCGCCG AGCTCGGCTT CGCGATCGCA ACGATCAATG CTTGGAATCT GCTGAACGTG
AGCTTCAGGA ATCCGATTCC GGAAACGGTG TAG
|
|---|
| Protein sequence | MAHAPRLPYP KLASKPFNAL LHLSETVWGG SLGKPLVDLV FLRVSQINGC AYCIDMHWRD
LVKLGVNERH LNAVAGWREA PFFDARERAA LQWAESVARI PHTDPSDEAF AHLQAHFSDA
EIAELGFAIA TINAWNLLNV SFRNPIPETV
|
|---|
| |