Gene BURPS1710b_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1341 
Symbol 
ID3688983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1408220 
End bp1409455 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content69% 
IMG OID637727797 
ProductYkgB 
Protein accessionYP_332751 
Protein GI76811174 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGAC GCGCTCACGC GCCTTCGCCG TTCGCTTTCC CCCTCAGGCT GAGCCACTGG 
ATGAAAGGTT TCGCGCTCGC GCTGCCGCTT TTCGGCAATC CCGCCTTCGC GCAGGACGCA
AGCGCCGGCC CCGCGGGCGG CGTGTACAAC CTGCTCGTCG GCACCTACAC GGGCTCGGGC
AGCGACGGCA TCTACGTGTA TCGCTTCGAT ACCGACTCGG GCCGGGTGAG CCCCGTGTCG
TCGGCGAAGG CCGAGAACCC GTCGTACCTC GTCGCGAGCC GCGACGGCCG CCACGTGTAT
GCGGTCAACG AACTGCCGGG TGACGCGGGC CCGGCGAGCG TGCGCGGCGG CGTCAGCGCG
TTCGATTTCG ACGCGAAGAC GGGCGCGCTC AAGTTCGTCA ACCGCGTATC GGCGCAAGGG
AACGATCCGT GTTACCTGAG CCTGTCGCCG GACGGGCGGT ATCTCGTCGT GGCGAATTAC
TCGGTCGCGT CCGATCCGGG CGGCAGCTTC TCGGTGTTCC CGGTCGAGGC GACGGGCGCG
CTCGGCGCCG CGGTGCTGAA CGTGCATCAC GAGGGCACGG GCCCGGTGAA GGGGCGGCAG
GACGGCGCGC ACGTCCATTC GACCGTGTTC TCGCCGGACG GCAAGTACCT GTTCGTGCAG
GATCTCGGCG CGGACAAGCT CTATTCGTAC CGCTACACGC CGGACGGCAG CCGCGGCCTC
ATCGGCCCGA CCGAGTCGCG CTACACGCTC GCGAAGGCGG GCTCGGGCCC GCGCCATCTG
GTGTTCGGCG CAAACGGGCG GTTCGCGTAC GTGACCAACG AGCTGAACGC GTCGGTCGAC
GTGTATCGCT ACGACGACGG CCGGCTCGCG CACGTCGAGA CCGTGCCGAT GACGGCGCCG
GGCTTCGCGG GCAAGGTGGG CGGCGGCGCG CTGCATCTGT CGCCGGACGG GCGCTTCCTG
TACGCGACCA ATCGCGGCGA CGCGAACGAC ATCGTGATCT ACGCGGTGAA CGCGGCCGAC
GGCAAGCTGA CGCTCGTCGG CCGGCAGTCG AGCCTCGGCA AGACGCCGCG CGAGTTCGCG
ATCGACCCGA GCGGCAAGTG GCTCATCGTC GGCAACCAGG ACAGCGACAG CGTGTTCGTG
TTCCGGCGCG ACATCGCGAG CGGCCGGCTC GAGCCGAATC CGGCGCGGAT CAGGATCGAC
AAGCCGGTCG ATTTCAAATT CGTGCCGGTG CAGTGA
 
Protein sequence
MTRRAHAPSP FAFPLRLSHW MKGFALALPL FGNPAFAQDA SAGPAGGVYN LLVGTYTGSG 
SDGIYVYRFD TDSGRVSPVS SAKAENPSYL VASRDGRHVY AVNELPGDAG PASVRGGVSA
FDFDAKTGAL KFVNRVSAQG NDPCYLSLSP DGRYLVVANY SVASDPGGSF SVFPVEATGA
LGAAVLNVHH EGTGPVKGRQ DGAHVHSTVF SPDGKYLFVQ DLGADKLYSY RYTPDGSRGL
IGPTESRYTL AKAGSGPRHL VFGANGRFAY VTNELNASVD VYRYDDGRLA HVETVPMTAP
GFAGKVGGGA LHLSPDGRFL YATNRGDAND IVIYAVNAAD GKLTLVGRQS SLGKTPREFA
IDPSGKWLIV GNQDSDSVFV FRRDIASGRL EPNPARIRID KPVDFKFVPV Q