Gene BURPS1710b_1336 details

Gene Information

• Locus tag: BURPS1710b_1336
• Symbol: nth
• ID: 3688615
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: -
• Start bp: 1401971
• End bp: 1402615
• Gene Length: 645 bp
• Protein Length: 214 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637727792
• Product: endonuclease III
• Protein accession: YP_332746
• Protein GI: 76811187
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0177] Predicted EndoIII-related endonuclease
• TIGRFAM ID: [TIGR01083] endonuclease III

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.70217
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCCA CCAAACGACG CGCGATCTTC GAAACGCTGC AGAGCCTCAA CCCGCATCCG 
ACCACGGAAC TCGAATACAC GACGCCGTTC GAGCTGTTGA TCGCGGTGAT GCTGTCGGCG 
CAGGCAACCG ACGTATCGGT CAACAAGGCG ATGCGCAAGA TGTTCCCGGT GGCCAACACG 
CCGAAGAAGA TCGTCGCGCT CGGCGAGGAA GGCGTCGCCG ACTACATCAA GACGATCGGC 
CTCTACCGGA CGAAGGCAAA GAACGTCGTC GCGGCGAGCC GTATCCTGCT CGAGCAATAC 
GGCGGCGAAG TCCCCGCCGA GCGCGAGGCG CTCGAGAGCC TGCCGGGGGT CGGCCGCAAG 
ACCGCGAACG TCGTGCTGAA CACCGCGTTC GGCCAGCCGA CGATCGCCGT CGACACGCAT 
ATCTTCCGCG TCGCGAACCG CACGGGGCTC GCGCCCGGCA AGGACGTGCG CGCGGTCGAG 
GCGGCGCTCG AGAAGCTCAC GCCGAAGGAA TTCCTGCACG ACGCGCATCA TTGGCTGATC 
CTGCACGGAC GCTACGTGTG CAAGGCGCGC AAGCCCGAAT GCTGGCATTG CGCGATCGAG 
CCGCTTTGCG AGTACAGGCC GAAGACGCCC GCGCCCATGC AGTGA 

 

Protein sequence

MNATKRRAIF ETLQSLNPHP TTELEYTTPF ELLIAVMLSA QATDVSVNKA MRKMFPVANT 
PKKIVALGEE GVADYIKTIG LYRTKAKNVV AASRILLEQY GGEVPAEREA LESLPGVGRK 
TANVVLNTAF GQPTIAVDTH IFRVANRTGL APGKDVRAVE AALEKLTPKE FLHDAHHWLI 
LHGRYVCKAR KPECWHCAIE PLCEYRPKTP APMQ