Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1308 |
Symbol | amaB-1 |
ID | 3688897 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1373352 |
End bp | 1374614 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637727764 |
Product | allantoate amidohydrolase |
Protein accession | YP_332718 |
Protein GI | 76810327 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGGCTT CGGCACTGGG CGGGCGGACG CTCGCGATCG ACGGCGAGCG GCTGTGGCGC TCGCTCATGG AGATGGCGCG CATCGGCGGC ACCGCGCACG GCGGCGTGCG GCGGCTTGCC GCGACCGACG ACGACCGGCG CGGGCGCGAC CGGTTCGCGC AGTGGTGTCG CGAAGCGGGC CTCGCGCTCA GCGTCGACGA GATCGGCAAT CTGTTCGCGC GCCGCGCGGG CGCGGAGGCC GGCGCGCCGC CCGTGCTGAT CGGCAGCCAT CTCGACACGC AGCCGGAAGG CGGCCGCTTC GACGGCACTT ACGGCGTGCT CGCGGCGCTC GAAGTCGTGC GCAGCCTGAA CGATGCGGGG ATCGTCACGC GCAAGCCGAT CGAGATCGTA TCGTGGACGA ACGAGGAGGG CGCGCGCTTC GCGCCGGCGA TGCTCGGCTC GGCGGTCGCG GCGGGCGTGA TGCCGCTCGC GCAGGCGCTC GCGGTGCGCG ACGCCGCAGG CGTGACGCTC GGCGACGCGC TCGAGCGGAT CGGCTATCGC GGCGCGCGGC GCGCGGTGCG TCCGGCGATC GATGCGTACT TCGAAGCGCA TATCGAACAG GGGCCGGTGC TGGAGGCGAA CGGCGTGGAG ATCGGCGTCG TCACGGGCGG GCAGGCGATT CGCTGGCTCG ACGTGACGAT CGCCGGGCAG CCCGCGCATG CGGGCACGAC GCCGGTCGCG CATCGCCGCG ACGCGCTGTT CGGCTTCGCG CAGATCGCGG ACGCGATCGA ACGGATGCTG GCCGAGTTCG CGCCGCACGG CCTGGCGACG ATCGGCTGCG TCGAGATTCC GAACGCGTCG CGCAACACGA TCGCGGGCGC GGTTGCGTTC ACGCTCGATC TGCGCCATCC GGACGACGCG ACGCTCGATG CGATGGCGCG CGCGGCGACC GACGCCTGCG CGCGCATCGC CGCGCGGCGC GGCTTGCGCG CCGACGTCTC GACGCATTGG GCGAGCCCGT CGACGCGGTT CGACGCGGCT TGCATCGCGA GCGTCGAGGC GGCCGCGGCA CGCTTCGGCT ATCGGCATGA GCGGATCGTG AGCGGCGCCG GACACGACGC GATCCATCTG GCCAAGCACG GCCCGGGCGC GATGGTGTTC ATTCCGTGTG TCGGCGGACT GTCGCACAAC GAAGCCGAGG CCGTGCTGCC CGCCGACGCG ACGCGCGGCG CGAACGTGCT GCTCGGCGCG GTGCTCGATC GAGCGGGCCG TGCCGCTCGA TGA
|
Protein sequence | MMASALGGRT LAIDGERLWR SLMEMARIGG TAHGGVRRLA ATDDDRRGRD RFAQWCREAG LALSVDEIGN LFARRAGAEA GAPPVLIGSH LDTQPEGGRF DGTYGVLAAL EVVRSLNDAG IVTRKPIEIV SWTNEEGARF APAMLGSAVA AGVMPLAQAL AVRDAAGVTL GDALERIGYR GARRAVRPAI DAYFEAHIEQ GPVLEANGVE IGVVTGGQAI RWLDVTIAGQ PAHAGTTPVA HRRDALFGFA QIADAIERML AEFAPHGLAT IGCVEIPNAS RNTIAGAVAF TLDLRHPDDA TLDAMARAAT DACARIAARR GLRADVSTHW ASPSTRFDAA CIASVEAAAA RFGYRHERIV SGAGHDAIHL AKHGPGAMVF IPCVGGLSHN EAEAVLPADA TRGANVLLGA VLDRAGRAAR
|
| |