Gene BURPS1710b_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1280 
Symbol 
ID3690890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1336060 
End bp1336971 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content59% 
IMG OID637727736 
ProductrmpB-like protein 
Protein accessionYP_332691 
Protein GI76809389 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.251408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCA TTCGATTTCT TGCCATCGAT CTTGCGAAGA ATGTCTTCCA GGTGCACGGC 
TTGGATGCTG CGGGCAAGCT TGTTCTGCGA CGCCGCGTCG GCCGCGCACA GCTGACAGAA
CTTGTTCTCC GGCTTGCGCC ATGCACTATA GGGATGGAAG CGTGCTCGAG CGCCCATCAC
TGGGCACGAC AGTTCCTGCA GCAAGGCCAC ACGGTCAAAC TCATCAGCCC GCAATTCGTG
AAACCCTTCG TAAAAGGCAA CAAGACCGAC GGCAACGATG CCGAGGCGAT CTGCGAGGCA
TTGCAGCGTC CTTCAATGCG CTTCGTGCCG ATCAAGTCGG TTGAGCAACA GGATGTGCAG
AGCCTTCATC GTGCCCGTAG TCGCCTTGTC AGCAACCGGA CAGGACTTGT GAGTCAGATG
CGGGGCATTC TCGCTGAGCG AGGCATCGTG CTCGCGCAAT CGATTACCCG TGCGCGTCGG
GAGATTCCTG TCATCGTCGC CGACACCTCG AATGCCTTGA CGCCGCTCGC GCGCGAGATG
CTCGCCGATC TGATGGATCA GTTGCGTGAG TTGGACAGGC GTATCGCAGG CTTCGACAGA
CGTATCGATT TGGTGTTCAA GGCCAGGAAA CCTGTCAGCG CATCGCGCAG ATTGAAGGGG
TTGGCCCCAA GACGGCTACC GCCATCGTTG CTGCAGTTTC TGACCCAAAA GACTTCCGGA
ACGGCCGACA CTTTGCTGCC TGGCTCGGTC TTGTTCCCCG TCAGAGTTCC AGCGGAGACC
GAACGCACCT ACTCGGCATC AGCAAGCGAG GCGACCGGCA TCTACGCACC TTGCTCATAC
ACGGTGCTCG CGCGGTACTC CGAACCGCAC CAACAAAACA TGACAAGAAA CACGCCTGGG
CGCTCGCGTT GA
 
Protein sequence
MDTIRFLAID LAKNVFQVHG LDAAGKLVLR RRVGRAQLTE LVLRLAPCTI GMEACSSAHH 
WARQFLQQGH TVKLISPQFV KPFVKGNKTD GNDAEAICEA LQRPSMRFVP IKSVEQQDVQ
SLHRARSRLV SNRTGLVSQM RGILAERGIV LAQSITRARR EIPVIVADTS NALTPLAREM
LADLMDQLRE LDRRIAGFDR RIDLVFKARK PVSASRRLKG LAPRRLPPSL LQFLTQKTSG
TADTLLPGSV LFPVRVPAET ERTYSASASE ATGIYAPCSY TVLARYSEPH QQNMTRNTPG
RSR