Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1256 |
Symbol | |
ID | 3689172 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1304586 |
End bp | 1306343 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637727712 |
Product | ABC transporter, permease protein |
Protein accession | YP_332667 |
Protein GI | 76811263 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTCG GATTCTTCGA TCCGAACCGG ACCGCCAACG CATCCGCGTG GCGGGTCCTG CCGAACCGCT GGGATTTCGT CGCGTTTCCG CTCATCATCT GCGTGATCGC GATGGCGGCG ATCGGCTTTC ACGAGACGAT GGCCCCCATC GCGACGCTCG AGACGCAGAG GATTTCGCTC GATCCGGCGA ACTTGCCCGA ATACGCGCTG CGCACGACGC TGCGCATGCT CGCGGCGATG GTCGCCGCGC TCGCGTTCAC GCTCGTCTAC GGCACGCTCG CCGCGAAGAG CCGCCGCGCG GGGATGGTGC TCGTGCCGAT CCTCGACATC CTGCAGTCGG TGCCCGTGCT CGGCTACATC TCGTTTACGG TCACGTTCTT CCTCGCGCTG ATTCCGAGCC GCGTGCTCGG CGCCGAGCTC GCCGCGATCT TCGCGATCTT CACGAGCCAG GCGTGGAACA TGACGTTCAG CTTCTACCAG TCGCTGCGCA CGGTGCCGCG CGATCTCGAC GAAGTGTCGC GCGGCTTTCA CCTGACCGCG TGGCAGCGCT TCTGGAAGCT CGAAGTGCCG TTCTCGATGC CAGGGCTCAT CTGGAACATG ATGATGTCGA TGTCGGGCGG CTGGTTCTTC GTCGTCGCGT CCGAGGCGAT CACGGTCGGC AACCACACGA TCACGCTGCC CGGCATCGGC GCTTATCTCG CGCAGGCGAT CGTCGAGAAG AACCTCGGCG CGGTCGGCTG GGTGATTCTC GCGATGACGG TGGTGATTCT CGCGTACGAC CAGCTCCTGT TCCGGCCGCT CGTCGCGTGG GCGGACAAGT TCCGGATGGA GACGACGAGC TCGGGCAACG CGCCCGAATC GTGGCTGCTC GACCTCGTGC GCCGCACGCG CCTCATCCAC CAGTTGCTCG TGCCGGCGGG CTGGTTCTTC GCGCGGCTCG CGCGGATTCC GCTGCGCGTG CCGTCGCTCG ACGCGGTCCG CTTCTCGATG CCGCGCGTCG AGAAGAAGGC GTCGCGCGCA GCCGACATCG CATGGGCGAT CGCCGTGATC GTCGGCACGG TCTATGTCGT GTGGCGCGTG TTCGCATACG TGAGCACGGG CGTGACGCTT GCCGAGGTCG GCCATGTGTT CGTGCTCGGG CTCATCACGC TGCTGCGCGT CGCGCTCCTG ATCGCGATCG CCTCGCTCGT GTGGGTGCCG ATCGGCGTGT GGATCGGCCT GCGGCCCGCG ATCGCCGAGA AGGTGCAGCC GCTCGCGCAG TTCCTCGCGG CGTTCCCGGC GAACCTGCTG TTCCCGGTGT TCGTGATCGT GATAGCGCGC TTTCACCTGA ACGCCGACAT CTGGCTGTCG CCTCTCATCG TGCTCGGCAC CCAGTGGTAT ATCCTGTTCA ACGTGATCGC GGGCGCGACC GCCTATCCGA ACGACTATCG CGAAGCGGCC ACCAATTTCC GCATCCGCGG CTGGCAATGG TGGCGGCAGG CGATCCTGCC CGGCATCTTC CCGTACTACG TGACGGGCGC GATCACCGCG TCGGGCGGCG CGTGGAACGC GAGCATCGTG TCGGAGTTCG TTCAGTGGGG CGACACCAAG ATCGAGGCGC ACGGCCTCGG CGCGTACATC GCGCAGACGA CGGCCGCGGG CGACTACCCG AAGATCATCC TGGGCATCGC CGTGATGTCC CTGTTCGTCA CCTTGTTCAA CCGCCTGTTG TGGCGTCCGC TGTATGCGTA CGCCGAAGCG AAGCTGCGTC TCGATTGA
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Protein sequence | MDLGFFDPNR TANASAWRVL PNRWDFVAFP LIICVIAMAA IGFHETMAPI ATLETQRISL DPANLPEYAL RTTLRMLAAM VAALAFTLVY GTLAAKSRRA GMVLVPILDI LQSVPVLGYI SFTVTFFLAL IPSRVLGAEL AAIFAIFTSQ AWNMTFSFYQ SLRTVPRDLD EVSRGFHLTA WQRFWKLEVP FSMPGLIWNM MMSMSGGWFF VVASEAITVG NHTITLPGIG AYLAQAIVEK NLGAVGWVIL AMTVVILAYD QLLFRPLVAW ADKFRMETTS SGNAPESWLL DLVRRTRLIH QLLVPAGWFF ARLARIPLRV PSLDAVRFSM PRVEKKASRA ADIAWAIAVI VGTVYVVWRV FAYVSTGVTL AEVGHVFVLG LITLLRVALL IAIASLVWVP IGVWIGLRPA IAEKVQPLAQ FLAAFPANLL FPVFVIVIAR FHLNADIWLS PLIVLGTQWY ILFNVIAGAT AYPNDYREAA TNFRIRGWQW WRQAILPGIF PYYVTGAITA SGGAWNASIV SEFVQWGDTK IEAHGLGAYI AQTTAAGDYP KIILGIAVMS LFVTLFNRLL WRPLYAYAEA KLRLD
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