| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1233 |
|---|
| Symbol | proP23 |
|---|
| ID | 3690763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 1284238 |
|---|
| End bp | 1285545 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637727689 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_332644 |
|---|
| Protein GI | 76809926 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGCA CCCTGCCCGC GACCACGCCG GACGCGCCGT CCGCCTTCGA GGCGGCCACC
TATCGCAAGG TTTCGTGGCG GCTCGCGCCG CTGTTGCTGC TCTGCTACGT GGTCGCGTAT
CTCGACCGCG TGAACGTCGG CTTCGCCAAG CTGCAGATGG CGGCCGACCT GCACCTGTCC
GATGCGGTCT ACGGCCTCGG CGCCGGGATC TTCTTCGTCG GCTATTTTCT GTTCGAAGTG
CCGAGCAACG TGATCCTGCA CAAGGTGGGC GCGCGCGTGT GGATCGCGCG GATCATGGTC
ACGTGGGGCA TCATCTCGGC GCTGACGATG TTCGTGTCGA CGCCCGCGAT GTTCTACACG
ATGCGCTTCC TGCTCGGCGT CGCGGAAGCG GGTTTCTTCC CCGGCGTGAT TCTCTACCTC
ACCTACTGGT ATCCGGCGCA CCGCCGCGGC AGGATGACGA CGCTGTTCAT GACGGCCGTC
GCGCTGTCGG GCGTCGTCGG CGGGCCGATC TCCGGCTACA TCCTGAAGAC GTTCGACGGC
ATGAACGGCT GGCGCGGCTG GCAGTGGCTG TTCCTGCTCG AAGGCGTGCC GTCGGTGCTC
GTCGGCATCC TGCTGCTGTT CGCGCTCGAC GACGGAATCG CGAAGGCGAA ATGGCTCGAC
GGCGACGAAA AGGCGCTGCT GTCGCGCAAC GTCGCCGCCG AGGAGGCGCG CAAGGAAGAC
CTGCCGCTTT CCGCCGTGTT CGCGAGCCCG CGCGTGTGGC TGATGGGCTT CATCTACTTC
TCGTTCGTGA TGGGGCTCTA CGGCGTCGGC TTCTGGCTGC CGACGATCAT CAAATCGACG
GGCGTGACCG ACGCGTTCGC GATCGGCCTT CTGTCCGCCG TGCCGTACGC GGCGGCCGTC
GTCGCGATGC TCGCGGTCGC GCGCAGCGCG GACCGCCGCC GCGAGCGGCG CTGGCATCTC
GCGATTCCGG CGGCGGCGGG CGCGCTCGGG CTCGTGCTGT CGGTCGTCTG GGCGCACGAC
ACCTTGCTCG CGATGCTCGG CCTGACGATC GCAACGATGG GCATCCTGAC GACGCTGCCG
CTCTTCTGGA GCCTGCCGAC CGCGTTCCTC GGCGGCACGG CCGCCGCCGC GGGCATCGCG
ATCATCAATT CGGTCGGCAA TCTCGCGGGC TTCCTGAGCC CGTACCTCGT CGGCTGGCTC
AAGCAGGCGA GCGCGTCGAA CGCGGCGGGG ATGTACATGC TCGCCGGTTT CCTCGTGCTG
GGCGGGCTGC TCGCGCTCAC GGTGCCCAAA TCGCTCGTCG ACATCTGA
|
|---|
| Protein sequence | MASTLPATTP DAPSAFEAAT YRKVSWRLAP LLLLCYVVAY LDRVNVGFAK LQMAADLHLS
DAVYGLGAGI FFVGYFLFEV PSNVILHKVG ARVWIARIMV TWGIISALTM FVSTPAMFYT
MRFLLGVAEA GFFPGVILYL TYWYPAHRRG RMTTLFMTAV ALSGVVGGPI SGYILKTFDG
MNGWRGWQWL FLLEGVPSVL VGILLLFALD DGIAKAKWLD GDEKALLSRN VAAEEARKED
LPLSAVFASP RVWLMGFIYF SFVMGLYGVG FWLPTIIKST GVTDAFAIGL LSAVPYAAAV
VAMLAVARSA DRRRERRWHL AIPAAAGALG LVLSVVWAHD TLLAMLGLTI ATMGILTTLP
LFWSLPTAFL GGTAAAAGIA IINSVGNLAG FLSPYLVGWL KQASASNAAG MYMLAGFLVL
GGLLALTVPK SLVDI
|
|---|
| |