Gene BURPS1710b_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1223 
Symbol 
ID3689451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1272384 
End bp1272941 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content64% 
IMG OID637727679 
Productspore coat protein U precursor 
Protein accessionYP_332634 
Protein GI76809826 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.174119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACGGA AAAACGACCA TAGCTACGGT GCGATTGCAA TGTATTTTCT TAAACACCCT 
CTGTTGTCGG CGCTCGCCGC CGCCGTTCTC GTCGCAACGC CGTCGTTTCG TCCCGCCACG
GCCGCGACCG CCACGGCCAC CTTCACCGTC TCGCTGACGA TCCAGGCCAA CTGCACGATT
TCCGCCAATG CGCTGTCGTT CGGCACGAAC GGCGTGCTCG CGACGGCCGT CAATCAGCAG
ACGACGCTGT CCGTCACCTG CTCGAACACG ACCTCCTACA ACGTCGGGCT CGACGCGGGC
AACGTGTCCG GCTCGACCGT CTCGAGCCGC CTGCTCGCCG GCACGACGAC GGGCAACACC
AGCACGACGG TCAGCTTCCA GCTCTATCAG GATTCGGGCC ATACCACGAT CTGGGGCAAT
ACAGTCGGCA CCAACACGGT GAGCGGTACC GGCAACGGCA CCGCGCAGAC GCTCAGCGTA
TACGGCCAGG TGCCCGCGCA AACGACGCCG AAGCCCGATA CCTACGAGTC GACCGTCACC
GCGACCATCA CCTTCTGA
 
Protein sequence
MVRKNDHSYG AIAMYFLKHP LLSALAAAVL VATPSFRPAT AATATATFTV SLTIQANCTI 
SANALSFGTN GVLATAVNQQ TTLSVTCSNT TSYNVGLDAG NVSGSTVSSR LLAGTTTGNT
STTVSFQLYQ DSGHTTIWGN TVGTNTVSGT GNGTAQTLSV YGQVPAQTTP KPDTYESTVT
ATITF