Gene BURPS1710b_1214 details

Gene Information

• Locus tag: BURPS1710b_1214
• Symbol: sodC
• ID: 3688266
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia pseudomallei 1710b
• Kingdom: Bacteria
• Replicon accession: NC_007434
• Strand: +
• Start bp: 1261837
• End bp: 1262376
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 74%
• IMG OID: 637727670
• Product: superoxide dismutase, Cu-Zn
• Protein accession: YP_332625
• Protein GI: 76808890
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2032] Cu/Zn superoxide dismutase

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGAC GACTCGACGG CGTGCCGGGG TGGCTCGCGC TCAATGCGCC GCTTGTCCTG 
GCCGCCATCG GCCTGTTGGC CGGCTGCACC ACCTTTGCCT CGCAACACGA AAAACGCGCC 
GACGCGCTGC TGCAGCCGAC CGTCGGCAGC CAGGCGCGCG GCACGGTGAC GCTCGCCGAA 
CGCCCGGACG GCGTGCAGGT CACGTACAAC TTCGCGGGCC TGCCGCCCAA CAGCGACCAC 
GCGTTGCAGG TTCACGAGCG CGGCGATTGC AACGCCGCCG ACGGCTCGAG CGCGGGCGCG 
GTATTCGCGC CCGCGGCCGA CCGGCTGCGC GCGGGCGCGC GCGTCGGCGG CGACCTCGGC 
AACATCCACG CGGATGCGAA CGGCGTCGCG GCGGGTTTCA TCACCGCGCC GGACCTCGCG 
CTCGACGGCG TGCGCTCGGT GCTCGGCCGC TCGGTGCTCG TCCATCGCGA TCCGGCAGAC 
CCGGCGTTCC CGCAGCACGG CGCGGGGCCC GCGCTTGCGT GCGGCGTCGT GCGGCAATGA 

 

Protein sequence

MKRRLDGVPG WLALNAPLVL AAIGLLAGCT TFASQHEKRA DALLQPTVGS QARGTVTLAE 
RPDGVQVTYN FAGLPPNSDH ALQVHERGDC NAADGSSAGA VFAPAADRLR AGARVGGDLG 
NIHADANGVA AGFITAPDLA LDGVRSVLGR SVLVHRDPAD PAFPQHGAGP ALACGVVRQ