Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1191 |
Symbol | cobT |
ID | 3688440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1234774 |
End bp | 1235832 |
Gene Length | 1059 bp |
Protein Length | 352 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 637727647 |
Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
Protein accession | YP_332602 |
Protein GI | 76811908 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.174274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCT CAACCTTTTC CCTGCCGAGC GTCGATCCGC TCGACGACGC CGCACTGCGC GCGACGCTCG CACGCATCAT CGATCACAAG ACGAAGCCGC CCGGCAGCCT CGGCCGTCTC GAAGCGCTCG CGCTGCAGCT CGGCATGATC CAGCGCACGA GCGCGCCGAG CGTCGCGCGC CCAGCGATGA TCGTGTTCGC CGGCGATCAC GGGATCGCCG CCGAAGGCGT GAGCCCGTAT CCGCAGGCGG TGACCGCGCA GATGGTCGCG AACTTCGTCG CGGGCGGTGC GGCGATCAAC GCGTTCTCCC GCGTCGCGGG CCTCGCGCTC GAGATCGTCG ATGCGGGCGT CGCGTCGCCG CTGCCGGCTT CGCCGCAGCT CGTCGACGCC GCGATCGCGC GCGGCACGCG CAACTTCGCG CAAGAGCGCG CGATGTCGCG GGACGAAGCG CTCGCCGCGC TCGCCGCGGG CGCCGCGCGC GTGCGGCATC ACGCGGCGCT CGGCACCAAC GTGATCGGCT TCGGCGAGAT GGGGATCGCG AACACCTCGG CGGCCGCGTG CATGATGAGC CGCCTGCTCG ACGTGCCGAT CGACGCGTGC GTCGGCCGCG GCACGGGCCT CGACGATGCG GGCCTCGCGC ACAAGCGCGC GGTGCTCGGG CGCGCGCTCG AGCGGCACGC GCACGCGCGC GAGCCGCTCG ACGTGCTCGC CGCGTTCGGC GGCTTCGAGA TCGCGATGAT CGCGGGCGCG TTCATCGAAG CGGCGCACGC GCGCATGGCG ATTCTCGTCG ACGGCTTCAT CGCGACGTCG GCGCTGCTCG TCGCCGACGC GCTCGCGCCC GTGGTGCGCG AATACTGCGT GTTCTCGCAC GTATCGAACG AAGCGGGGCA TCGGCGCATG CTCGAGCACC TCGGCGGCGA GCCGCTCCTC GCGCTCGACC TGCGTCTCGG CGAGGGCACG GGCGCCGCGC TCGCGCTGCC GCTCGTGCGC GCGGCGGCGG CGTTCGTCAA CGAGATGGCG AGCTTCGAAT CGGCGGGCGT GGCGAACCGC GATGCGTGA
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Protein sequence | MTTSTFSLPS VDPLDDAALR ATLARIIDHK TKPPGSLGRL EALALQLGMI QRTSAPSVAR PAMIVFAGDH GIAAEGVSPY PQAVTAQMVA NFVAGGAAIN AFSRVAGLAL EIVDAGVASP LPASPQLVDA AIARGTRNFA QERAMSRDEA LAALAAGAAR VRHHAALGTN VIGFGEMGIA NTSAAACMMS RLLDVPIDAC VGRGTGLDDA GLAHKRAVLG RALERHAHAR EPLDVLAAFG GFEIAMIAGA FIEAAHARMA ILVDGFIATS ALLVADALAP VVREYCVFSH VSNEAGHRRM LEHLGGEPLL ALDLRLGEGT GAALALPLVR AAAAFVNEMA SFESAGVANR DA
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