Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1146 |
Symbol | livF |
ID | 3689205 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1194825 |
End bp | 1195541 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637727602 |
Product | branched-chain amino acid ABC transporter, ATP-binding protein |
Protein accession | YP_332558 |
Protein GI | 76811024 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.000313887 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCGG CAATGTTGAA GATCAAGGGC TTGCAGGTCA ACTACGGCGG CATCCAGGCC GTCAAGGGCG TTGACATGGA AGTCCGTCAG GGCGAGCTCG TCACGCTGAT CGGCGCGAAC GGCGCGGGCA AGACCACGAC GATGAAGGCG ATCACGGGCC TGAAGCCGTA CTCGGCGGGC GACATCGAGT ACGACGGCCA GTCGATCAAG GGCGTGCCGC CGCACGAGCT GCTCAAGCGC GGCCTCGCGA TGGTGCCGGA AGGCCGCGGG ATCTTCGCGC GGATGTCGAT CATCGAGAAC ATGCAGATGG GCGCGTATCT GCGCAACGAC AACGAGCAGA TCAAGAAGGA CGTCGAGCGG ATGTTCGGCT TCTTCCCGCG CCTGAAGGAG CGGGCGACGC AGCTCGCGGG CACGCTGTCG GGCGGCGAGC AGCAGATGCT CGCGATGTCG CGCGCGATTC TGTCGAAGCC GAAGCTGCTG CTGCTCGACG AGCCGTCGAT GGGCCTGTCG CCGATCATGG TCGAGAAGAT TTTCGAAGTG GTGCGCGAGA TCTCGAAGGA GGGGATCACG GTGCTGCTCG TCGAGCAGAA CGCACGCCTC GCGCTGCAGG CGGCCGACCG CGGCTACGTG ATGGATTCGG GCACGGTCAC GATGGAAGGC GACGCGAAGC AGATGCTCGA CGATCCGAAG GTGCGCGCCG CGTACCTCGG CGAGTAA
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Protein sequence | MAAAMLKIKG LQVNYGGIQA VKGVDMEVRQ GELVTLIGAN GAGKTTTMKA ITGLKPYSAG DIEYDGQSIK GVPPHELLKR GLAMVPEGRG IFARMSIIEN MQMGAYLRND NEQIKKDVER MFGFFPRLKE RATQLAGTLS GGEQQMLAMS RAILSKPKLL LLDEPSMGLS PIMVEKIFEV VREISKEGIT VLLVEQNARL ALQAADRGYV MDSGTVTMEG DAKQMLDDPK VRAAYLGE
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