Gene BURPS1710b_1144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1144 
SymbollivM 
ID3689004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1192820 
End bp1193989 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content66% 
IMG OID637727600 
Productbranched-chain amino acid ABC transporter, permease protein 
Protein accessionYP_332556 
Protein GI76811078 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00400001 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACATCCA TTCAACCGAT CGAAACATCG GCTTCGCTCG TCGAGGAACG CCACCCCGCG 
AAGACCGCCA CCGTCGGCAT CCTGATCGCG GCGTTCGTGA TCGCCGCGCC GCTCGTCATC
GGCGCGGCGG GCGGCAACTA CTGGGTCCGC GTGCTCGACT TCGCGATGCT GTACGTGATG
CTCGCGCTCG GCCTGAACGT GGTGGTCGGC TTCGCCGGCC TGCTCGATCT CGGCTACATC
GCGTTCTACG CGGTGGGCGC CTATACCGCG GCGCTGTTGA GCTCGCCGCA CCTGACGTCG
CACTTCGACT GGATCGCGCA GATGGTGCCG GGCGGCCTGC ACGTGCCGTT CCTGCTGATC
GTGCCGATCG CGATGGCGCT CGCGGCGATC TTCGGCATCC TGCTCGGCGC GCCGACGCTG
CGCCTGCGCG GCGATTACCT CGCGATCGTC ACGCTCGGCT TCGGCGAGAT CGTCCGGATC
TTCATGAACA ACCTCGACCG CCCGGTCAAC GTGACGAACG GGCCGCAAGG GATCACCGGC
ATCGATCCCG TCCAGGTCGC GGGCTTCAAC CTGTCGCAGA CGCACGAGAT CTTCGGCTTC
TCGCTGCCGT CCGTGTACAT GTACTACTAC CTGTTCGTGC TCTGCGCGCT GCTCGTCATC
TGGGTCTGCA CGCGCCTGCA GCACTCGCGG ATCGGCCGCG CATGGGCCGC GATTCGCGAA
GACGAGATCG CCGCGAAGGC GATGGGCATC AACACCCGCA ACGTGAAGCT GCTCGCGTTC
GCGATGGGCG CGTCGTTCGG CGGCCTGTCG GGCGCGATGT TCGGCGCGTT CCAGGGCTTC
GTGTCGCCGG AATCGTTCAC GTTCTGGGAA TCGGTCGTCG TGCTCGCGTG CGTCGTGCTG
GGCGGCATGG GCCACATCCC GGGCGTGATT CTCGGCGCGG TCCTGCTCGC CGTGTTCCCC
GAATTCCTGC GCTCGACGAT GAGCCCGCTG CAGCACATGC TGTTCGGCCA CGACATCGTC
GATACCGAAG TGATTCGCCA GGCTCTCTAC GGCCTCGCGA TGGTGGTCAT CATGCTGTAT
CGCTCGGAAG GCCTGTGGCC CGCGCCGAAG CACGAGGATC GGATCGCGAA ACTGGCGAAG
CGCGGCGGCA AGAAGCCGGT GCGCGCGTAA
 
Protein sequence
MTSIQPIETS ASLVEERHPA KTATVGILIA AFVIAAPLVI GAAGGNYWVR VLDFAMLYVM 
LALGLNVVVG FAGLLDLGYI AFYAVGAYTA ALLSSPHLTS HFDWIAQMVP GGLHVPFLLI
VPIAMALAAI FGILLGAPTL RLRGDYLAIV TLGFGEIVRI FMNNLDRPVN VTNGPQGITG
IDPVQVAGFN LSQTHEIFGF SLPSVYMYYY LFVLCALLVI WVCTRLQHSR IGRAWAAIRE
DEIAAKAMGI NTRNVKLLAF AMGASFGGLS GAMFGAFQGF VSPESFTFWE SVVVLACVVL
GGMGHIPGVI LGAVLLAVFP EFLRSTMSPL QHMLFGHDIV DTEVIRQALY GLAMVVIMLY
RSEGLWPAPK HEDRIAKLAK RGGKKPVRA