Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1144 |
Symbol | livM |
ID | 3689004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1192820 |
End bp | 1193989 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637727600 |
Product | branched-chain amino acid ABC transporter, permease protein |
Protein accession | YP_332556 |
Protein GI | 76811078 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00400001 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACATCCA TTCAACCGAT CGAAACATCG GCTTCGCTCG TCGAGGAACG CCACCCCGCG AAGACCGCCA CCGTCGGCAT CCTGATCGCG GCGTTCGTGA TCGCCGCGCC GCTCGTCATC GGCGCGGCGG GCGGCAACTA CTGGGTCCGC GTGCTCGACT TCGCGATGCT GTACGTGATG CTCGCGCTCG GCCTGAACGT GGTGGTCGGC TTCGCCGGCC TGCTCGATCT CGGCTACATC GCGTTCTACG CGGTGGGCGC CTATACCGCG GCGCTGTTGA GCTCGCCGCA CCTGACGTCG CACTTCGACT GGATCGCGCA GATGGTGCCG GGCGGCCTGC ACGTGCCGTT CCTGCTGATC GTGCCGATCG CGATGGCGCT CGCGGCGATC TTCGGCATCC TGCTCGGCGC GCCGACGCTG CGCCTGCGCG GCGATTACCT CGCGATCGTC ACGCTCGGCT TCGGCGAGAT CGTCCGGATC TTCATGAACA ACCTCGACCG CCCGGTCAAC GTGACGAACG GGCCGCAAGG GATCACCGGC ATCGATCCCG TCCAGGTCGC GGGCTTCAAC CTGTCGCAGA CGCACGAGAT CTTCGGCTTC TCGCTGCCGT CCGTGTACAT GTACTACTAC CTGTTCGTGC TCTGCGCGCT GCTCGTCATC TGGGTCTGCA CGCGCCTGCA GCACTCGCGG ATCGGCCGCG CATGGGCCGC GATTCGCGAA GACGAGATCG CCGCGAAGGC GATGGGCATC AACACCCGCA ACGTGAAGCT GCTCGCGTTC GCGATGGGCG CGTCGTTCGG CGGCCTGTCG GGCGCGATGT TCGGCGCGTT CCAGGGCTTC GTGTCGCCGG AATCGTTCAC GTTCTGGGAA TCGGTCGTCG TGCTCGCGTG CGTCGTGCTG GGCGGCATGG GCCACATCCC GGGCGTGATT CTCGGCGCGG TCCTGCTCGC CGTGTTCCCC GAATTCCTGC GCTCGACGAT GAGCCCGCTG CAGCACATGC TGTTCGGCCA CGACATCGTC GATACCGAAG TGATTCGCCA GGCTCTCTAC GGCCTCGCGA TGGTGGTCAT CATGCTGTAT CGCTCGGAAG GCCTGTGGCC CGCGCCGAAG CACGAGGATC GGATCGCGAA ACTGGCGAAG CGCGGCGGCA AGAAGCCGGT GCGCGCGTAA
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Protein sequence | MTSIQPIETS ASLVEERHPA KTATVGILIA AFVIAAPLVI GAAGGNYWVR VLDFAMLYVM LALGLNVVVG FAGLLDLGYI AFYAVGAYTA ALLSSPHLTS HFDWIAQMVP GGLHVPFLLI VPIAMALAAI FGILLGAPTL RLRGDYLAIV TLGFGEIVRI FMNNLDRPVN VTNGPQGITG IDPVQVAGFN LSQTHEIFGF SLPSVYMYYY LFVLCALLVI WVCTRLQHSR IGRAWAAIRE DEIAAKAMGI NTRNVKLLAF AMGASFGGLS GAMFGAFQGF VSPESFTFWE SVVVLACVVL GGMGHIPGVI LGAVLLAVFP EFLRSTMSPL QHMLFGHDIV DTEVIRQALY GLAMVVIMLY RSEGLWPAPK HEDRIAKLAK RGGKKPVRA
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