| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1129 |
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| Symbol | aefA |
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| ID | 3688486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 1180843 |
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| End bp | 1182192 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637727585 |
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| Product | mechanosensitive ion channel family protein |
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| Protein accession | YP_332541 |
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| Protein GI | 76810296 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3264] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACC ACCTCACACG GCGGCTCGCG GCCGTCGCGC ACGACTTCGG CCAGCCGGCG
ATGATCTGGC AGGCGGTCGC GTTCTTCGGC TCGCTCGCGC TCGCGTGGCT GCTCGCGCGC
CATCTGCGCG GGCGCATCGA CGCGCGCCGT CGCGCGGCCG GGCGCACGCC CGGCCCGGGC
GCGCTGAGCC TGAACCGCGC GCTGTTCCCG CTCATCGGCG GCGTGTTCAT GTGGCTCGCG
GAGACGACGT TCGACGAGCT GATGCCGACG TCGCTCCTGC AGCTCGCGCT CGTGCCGCTC
TTCGGCATCG GGCTCATCTA CATCCTGTTC TTCGTCGCGC GCCGCGTGTT CGCGCGCGAC
GGCCACACGC ACGCGTGGCT GTCGATCGTC GAGAAGCTCG TGTCGATCGT CGTGTGGATC
GCGATGGCGC TCACGGTACT CGGCATCCAG CGCGACGTGC TCGGCTGGCT CGACAGCGTC
CAGTTCCGCG TCGCGAACGC GCGCCTCACG CTGCTGTCGA TCGTGTCGGG CGCGCTGTGG
GTCTGCGTGA CGCTCGTCGT CGCGATGTGG CTCGGCTCGG TGCTCGAGGA GCGGCTGATG
CGCGCGCGCT CGCTCGACGC GAACCTGCGG GTCGTGCTCG CGCGCGTCGG CCGTGCGCTC
CTCATCTTCG CGGCGGTGCT GATCGGGCTG TCGCTCGTCG GCATCGACGT GACCGTGCTC
GGCGTGTTCG GCGGCGCGCT CGGCGTCGGG CTCGGCTTCG GCCTGCAGAA AATTGCGAGC
AACTATGTGT CGGGCTTCAT CATCCTGCTC GACCGCTCGC TGCGGCTCGG CGACGCGATC
AACGTGGGCG GCCTGCAGGG CGTCGTCACG CAGATCCGCA CGCGCTACAC GGTCGTGCGC
GGCCTCGACG GCAACGAGAC GCTGATTCCG AACGAGAAGC TCATCACCGA CGTCGTGCAG
AACCAGTCGT CGTACCTGAC GCGCGGCTAC GCGAAGGTCG CGGTTCAGGT CGCGTACACG
TCGGACGTCG AGCACGCGAT GGCGCTGCTC GCCGACGCGG CGAAGGGCGT CGAGCGCGTG
CTCGAGGATC CGGCGCCCAC GCCTTATCTC GTCGGCTTCG GCGCGGACGG CATCGATCTC
GAGCTCGGCT TCTGGATCGC CGACGCGGCG AAGGGGACGG CCGGCGTGCG CTCGACGGTC
AACCGCAACA TCTGGCGGCT TTTTGTCGCA CACGGGATCT CGATTCCGTT CCCGCAGCGG
GAGGTGCGCG TGATCGGGCT GCCCGACGGC ATCGCGCCCG CGGCCGGCGC AGCCGGCCCG
GCGGCGGGGC GCCAGCCGCA GGACGCCTAG
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| Protein sequence | MTNHLTRRLA AVAHDFGQPA MIWQAVAFFG SLALAWLLAR HLRGRIDARR RAAGRTPGPG
ALSLNRALFP LIGGVFMWLA ETTFDELMPT SLLQLALVPL FGIGLIYILF FVARRVFARD
GHTHAWLSIV EKLVSIVVWI AMALTVLGIQ RDVLGWLDSV QFRVANARLT LLSIVSGALW
VCVTLVVAMW LGSVLEERLM RARSLDANLR VVLARVGRAL LIFAAVLIGL SLVGIDVTVL
GVFGGALGVG LGFGLQKIAS NYVSGFIILL DRSLRLGDAI NVGGLQGVVT QIRTRYTVVR
GLDGNETLIP NEKLITDVVQ NQSSYLTRGY AKVAVQVAYT SDVEHAMALL ADAAKGVERV
LEDPAPTPYL VGFGADGIDL ELGFWIADAA KGTAGVRSTV NRNIWRLFVA HGISIPFPQR
EVRVIGLPDG IAPAAGAAGP AAGRQPQDA
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