Gene BURPS1710b_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1121 
SymbollspA 
ID3690674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand- 
Start bp1174341 
End bp1174841 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content66% 
IMG OID637727577 
Productlipoprotein signal peptidase 
Protein accessionYP_332533 
Protein GI76810209 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0597] Lipoprotein signal peptidase 
TIGRFAM ID[TIGR00077] lipoprotein signal peptidase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.458352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAAGA CCCTGTCGAA ATCCTCGGGC GGCGCGCTCG CGCCGTGGCT CGGCATCTCG 
CTGATCGTGA TCCTGTTCGA TCAGTTGACG AAGATCGCCG TGCTCAAGAC GTTCGCGTAC 
GGCGCGATGC ACGCGCTCAC GCCGTTCTTC AACCTGACGC TGATCTACAA CCGCGGCGCC 
GCGTTCGGCT TTCTCGCGAC GGCGGGCGGC TGGCAGCGCT GGGCGTTCAC CGCGCTCGGC 
ATCGGCGCGA CGCTCGTGAT CTGCTATCTG CTCAAGCGCC ACGGCCACCA GCGGCTCTTC 
AGCCTGTCGC TCGCGCTGAT TCTCGGCGGC GCGCTCGGCA ACGTGATCGA TCGCCTGATC 
TACGGTCACG TGATCGATTT CCTCGACTTC CACGTCGGCG CGTGGCACTG GCCCGCGTTC 
AATCTCGCCG ACTCCGCGAT CACGGTGGGC GCGGTGCTCC TCATCTACGA CGAGCTGCGT 
CGCGTGCGCG GCGCGCGCTA A
 
Protein sequence
MAKTLSKSSG GALAPWLGIS LIVILFDQLT KIAVLKTFAY GAMHALTPFF NLTLIYNRGA 
AFGFLATAGG WQRWAFTALG IGATLVICYL LKRHGHQRLF SLSLALILGG ALGNVIDRLI 
YGHVIDFLDF HVGAWHWPAF NLADSAITVG AVLLIYDELR RVRGAR