| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1110 |
|---|
| Symbol | |
|---|
| ID | 3691031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | + |
|---|
| Start bp | 1164023 |
|---|
| End bp | 1165798 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637727566 |
|---|
| Product | mulitcopper oxidase domain-containing protein |
|---|
| Protein accession | YP_332522 |
|---|
| Protein GI | 76810604 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000312715 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGCG ACACCCCGGC GGGCCGCGTG GCCGCCGGGG TGTTTCATTT TGGTGCCGCG
CGTGCGCGCG TTGTCCGCAC GCGAAGTGCA GCGTGCGCGC CGACTGGTGT ATTGTCGGAA
CCTCCGCTTC GACAACACGG GAATCGATCG ATGTTGCGCA GACATTTCCT TTCGAGCGCG
CTGGCGGCGG CCGCCGCGTC GCTTTTCGCG CGCGGCGCGT TTGCCGCAGG CCAAGCGATG
GACGGCATGC AGGGCATGGA AGGCATGGAA GGCATGGACG ACATGCCGGA CATGAAGCCC
GCGCCGGCTC ACGCGCGGCA CGGCAAGCCG GCGCCCGGGC CCGCTTCCGC GCTGGCCGCC
GCCGACGCGC TGCCGGCGGG CGCGCCGCTT GCCGCGTTGC GCGTGCTTGC AAACGAGAGC
CGCGAGCCGG GCGTATTTCG CGCGACGCTC GTTGCGCAGC CCGTCGCGCG CGCGCTCCTG
CCGGGCGCCG CGCCGACGAC GCTCTGGCAG TTCGGCGCCG ACACGCAAGG GCCCGCGGTC
GGCCCGCTCA TCGACGTGCG CGAAGGCGAT GCGGTCGAGA TCCGCTTCGT GAACCGGCTG
CCGCAGCCGT CGACGATCCA CTGGCACGGA TTGCCGGTGC CGCCCGATCA GGATGGCAAT
CCGTCCGATC TCGTCGCGCC GGGTGCGACG CGCGTCTATC GTTTCACACT GCCGAAAGGC
AGCGCGGGCA CGTACTGGTA TCACCCGCAT CCGCACATGG CGACGGCCGA GCAGGTGTTT
CGCGGGCTCG CCGGCCCGAT CGTCGTGCGC GCGGCCGACG ATCCGCTCGC CGGCTGGCCC
GAGCGGCATC TGTTCGTGTC CGATCTGAAG CTCGCGCGCG ACGGCGCGAT CGCGCCGAAC
GACATGATGG ATTGGATGAA CGGTCGCCAA GGTCAGTTCG CGCTCGTCAA CGGTGCGCGA
CGGCCGCGCA TTTCGCTCAC CGGCGACGAA CGCTGGCGCG TATGGAACGG GTGCAGCGCG
CGCTACTTGC GCATCGCGTT CGACGACGGA AGGCCGTTTG CGCACGTCGG CACGGACGGC
GGGCTGTTCG ACGCGCCGCG CGAGGTGGCC TCGCTGTTGC TCGCGCCGGG CGAGCGCGCC
GAGCTCGTCG TGCGCGCGGG CGACCGTGCG TCGCACGCGG TGCTGACCGC GCTCGAGTAC
GATCGCGGCA AGATGGCGAT GGCGATGGCG ATGTCGGAGG CGGCGCACGG CAGCCTGCCG
CCCGATCCCG CGCTGCCGCT CGCCGACGTC GCATTCGAGC CGGCCGCGCC GCGCGCGTTG
CCCGCCCGGC TGCGCGCGGT GCCCGCGCTC GGCGAGCCGG TCGCGCGCAA GGAGGTCGTG
TTCGGCGAGC AGATGGACAT GGCCGCGATG ATGCGCGCGG GCGCGCATGG TCGACCGGCC
GGCATGCGCT TCATGGTGAA CGGCGCGACG TTCGAGCCGC ATCGCGCGAC GCTGACGAGC
CGGCGCGGCG AGATCGAATC ATGGACGATT CGCAACGAAA CCGACATGGA TCACCCGTTT
CATCTGCACG GCACGCAATT CCAGGTCGTC GAGCGCGAGA TCGACGGCGA GACGACGCCC
GAGCCCTATC GCGCGTGGCG CGACACGGTG AACGTTCGGA AGGGCGAGCG CGTGCGGATT
CTCACGACGC AGACCGAGCG CGGCGAGCGG ATGTTCCACT GCCACATTCT CGAGCACGAG
GATCTCGGGA TGATGGGGAC GCTGAAAGTC GTTTGA
|
|---|
| Protein sequence | MSSDTPAGRV AAGVFHFGAA RARVVRTRSA ACAPTGVLSE PPLRQHGNRS MLRRHFLSSA
LAAAAASLFA RGAFAAGQAM DGMQGMEGME GMDDMPDMKP APAHARHGKP APGPASALAA
ADALPAGAPL AALRVLANES REPGVFRATL VAQPVARALL PGAAPTTLWQ FGADTQGPAV
GPLIDVREGD AVEIRFVNRL PQPSTIHWHG LPVPPDQDGN PSDLVAPGAT RVYRFTLPKG
SAGTYWYHPH PHMATAEQVF RGLAGPIVVR AADDPLAGWP ERHLFVSDLK LARDGAIAPN
DMMDWMNGRQ GQFALVNGAR RPRISLTGDE RWRVWNGCSA RYLRIAFDDG RPFAHVGTDG
GLFDAPREVA SLLLAPGERA ELVVRAGDRA SHAVLTALEY DRGKMAMAMA MSEAAHGSLP
PDPALPLADV AFEPAAPRAL PARLRAVPAL GEPVARKEVV FGEQMDMAAM MRAGAHGRPA
GMRFMVNGAT FEPHRATLTS RRGEIESWTI RNETDMDHPF HLHGTQFQVV EREIDGETTP
EPYRAWRDTV NVRKGERVRI LTTQTERGER MFHCHILEHE DLGMMGTLKV V
|
|---|
| |