| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1107 |
|---|
| Symbol | |
|---|
| ID | 3691358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 1161900 |
|---|
| End bp | 1162607 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637727563 |
|---|
| Product | pseudouridine synthase family protein |
|---|
| Protein accession | YP_332519 |
|---|
| Protein GI | 76811867 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
|---|
| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000232498 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGACC CGCGCAAGTC TTATATAAGA CAAAAGACTC GCCGTTCCGT ATTATGCATT
AAGATTCCGC CATTTGCCAT AGAACGCGGC CCGCGTCGCG CCGCCCCTCT CCCCCGCGAG
CCTTGCCCCA TGCGCCTCAT CGCCCTCAAC AAGCCGTTCG GCACGATCTG CCAGTTCTCT
GCGCACGAAA CCCGCGCATC GCTCGGCGAC TGGGTGAAGA CGCCCGGCGT CTATCCGGCG
GGCCGCCTCG ATGCCGACAG CGAGGGGCTG CTCCTGCTCA CCGACGACGG CGCGCTGCAG
GCGAAGATCG CCGAGCCGCG CCACAAGCTC GTCAAGCGCT ACTGGGCGCA GGTCGAGGGC
GCGCCCGACG CGGCCGCGCT CGCCGCGCTC GAGCGCGGCG TCGATCTCGG CGATTACGTG
AGCCGCCCGT GTCGCGCGCG CTTCATCACG CCGCCCGGCG CGCTCTGGCC GCGCAACCCG
CCGATCCGCC ACCGCGCGGC GATCCCGACG GCCTGGATCG AACTCGAGAT CGCCGAAGGC
AAGAACCGCC AGGTGCGGCG AATGACCGCG GCCGTCGGCT TCCCGACGCT GCGCCTCGTT
CGCGTCGGCA TCGGCGCGCT CGACGTGTTC GCGCTCGGCC TTGCGCCCGG CGAAACGCGC
GAGCTGCCGC CGCGCGCGCC GTGGGAACGC GCACAGCGGC CCGGATGA
|
|---|
| Protein sequence | MRDPRKSYIR QKTRRSVLCI KIPPFAIERG PRRAAPLPRE PCPMRLIALN KPFGTICQFS
AHETRASLGD WVKTPGVYPA GRLDADSEGL LLLTDDGALQ AKIAEPRHKL VKRYWAQVEG
APDAAALAAL ERGVDLGDYV SRPCRARFIT PPGALWPRNP PIRHRAAIPT AWIELEIAEG
KNRQVRRMTA AVGFPTLRLV RVGIGALDVF ALGLAPGETR ELPPRAPWER AQRPG
|
|---|
| |