| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1064 |
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| Symbol | amiC |
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| ID | 3689851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 1118054 |
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| End bp | 1119598 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637727520 |
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| Product | N-acetylmuramoyl-L-alanine amidase, AMIC precursor protein |
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| Protein accession | YP_332476 |
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| Protein GI | 76810749 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.130481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGATCA AACCGTTCCG CTCGATCGAA TCGGCGGCCA CCGCGACCCA TAACTGGCGG
CGCCGGCAGA TCCTGCGCGC CGGCGCGTCG ACGCTCGTGC TCGGGCTCGC GCTGCCGCGT
CTCGCGCACG CGAGCTCGGT GCTCGGCGTG CGCGTGTGGC CCGCGCGCGA CTACACGCGC
GTGACGATCG AATCGGATCA GCCGCTGCAG AACACCCAGC AACTGCTGCA GGGGCCGGAC
CGGCTCGTCG TCGATCTGAA CGGCCTCGAG CTCGACCAGG CGCTGCGCGA CCTCGTCTCG
AAGATCGCGC CGAACGATCC GCAGATCCAG TCGGTGCGCG TCGGCCAGTA TCAGCCGCAC
GTGGTGCGGA TGGTGTTCGA CCTGAAGGGC TCGGTGAAGC CGCAGGTGTT CACGCTGCCG
CCCGTCGGCA CCTACAAGTA CCGGCTCGTG TTCGACCTGT ATCCGGCCGT CGCCCCCGAT
CCGCTGTCCG ATCTGATCGC GCAGACGGAG CGCAAGGAAC AGCAGTTGAA TGACACGCTG
CGCGCGCAGC AGGCGCAGCC GCCCACGGCC GCGCTCAACG GCCCGACCGC CGCGCCGCCC
GCCGCGACGG ACAACAGCGA TGCGTTCTTC CAGCGCTTCG CGCAGAACAA CCCGCCGGCC
GCGCATTCGG CGCGGCCGGC GCCCGCCAAT CCGCCCGTCG CGCAAGCGAG CCCGCCCGCC
GCACCGCCGC GGCCCGCGGT CAAGCCGCCG CCCGTCATCG CGCGCAGGAA CGACGACGAT
TCGGGCGACA CCGACACCTA CGCGTTCACC GCGCCGAAAT CCGGCCGCGG CACCGTGCGC
CTGCTGACGG TGGCGATCGA TCCGGGCCAC GGCGGCGAGG ATCCGGGCGC GATCGGCGGC
GGCGGCACGT ACGAAAAGCA CATCGCGCTC GACATCGCAA AGAAGCTGCG CGCGAAGATC
GACGCCGCGC CGAACATGCG CGCGATGATG ACGCGCGACG CCGATTTCTT CGTGCCGCTG
AACGTGCGCG TGCAGAAGGC GCGGCGCGTC GGCGCGGATC TGTTCGTGTC GATCCACGCG
GATGCGTTCA CGACGCCGTC GGCGCGCGGC TCGTCGGTGT TCGCGCTGTC GGACCACGGC
GCGTCGAGCG CGGCCGCGCG CTGGCTCGCG AACAAGGAGA ACTCCTCCGA TCTGATCGGC
GGGATCAACA TCAAGACGCA GGACGTCGCG GTGAACCGCG CGCTGTTCGA TATGTCGACG
ACCGCGCAGA TCCGCGATTC GCTGCGCTAC GGCAACTACG TGCTGCGCGA AGTCGGCGGC
ATCAACAAGC TGCACAAGGG CTCGGTCGAG CAGGCGGGGT TCGCGGTGCT CAAGGCGCCC
GATATTCCGT CGATCCTCGT CGAGACCGCG TTCATCAGCA ATCCGGACGA AGAGCGGCGC
CTGAACGACG ACGCGTATCG CGACCAGATG GCCGATGCGA TCTTCCGCGG AATCAAGCGC
TATTTCTCGG CGAACCCGCC GCTCGCGAAG AGCCGGATGA CGTAA
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| Protein sequence | MLIKPFRSIE SAATATHNWR RRQILRAGAS TLVLGLALPR LAHASSVLGV RVWPARDYTR
VTIESDQPLQ NTQQLLQGPD RLVVDLNGLE LDQALRDLVS KIAPNDPQIQ SVRVGQYQPH
VVRMVFDLKG SVKPQVFTLP PVGTYKYRLV FDLYPAVAPD PLSDLIAQTE RKEQQLNDTL
RAQQAQPPTA ALNGPTAAPP AATDNSDAFF QRFAQNNPPA AHSARPAPAN PPVAQASPPA
APPRPAVKPP PVIARRNDDD SGDTDTYAFT APKSGRGTVR LLTVAIDPGH GGEDPGAIGG
GGTYEKHIAL DIAKKLRAKI DAAPNMRAMM TRDADFFVPL NVRVQKARRV GADLFVSIHA
DAFTTPSARG SSVFALSDHG ASSAAARWLA NKENSSDLIG GINIKTQDVA VNRALFDMST
TAQIRDSLRY GNYVLREVGG INKLHKGSVE QAGFAVLKAP DIPSILVETA FISNPDEERR
LNDDAYRDQM ADAIFRGIKR YFSANPPLAK SRMT
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