| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1053 |
|---|
| Symbol | |
|---|
| ID | 3689313 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 1104431 |
|---|
| End bp | 1105366 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637727509 |
|---|
| Product | tryptophan 2,3-dioxygenase family protein |
|---|
| Protein accession | YP_332465 |
|---|
| Protein GI | 76811053 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3483] Tryptophan 2,3-dioxygenase (vermilion) |
|---|
| TIGRFAM ID | [TIGR03036] tryptophan 2,3-dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAATTCAG GTCACATGCA GCCACCCGGC GACGACGCCG CGCCCCGCTG CCCGTTCGCC
GGCGCGCACG CGCCCGACGC GCCGCACGTG CCCGAGGCCG CCGGCGACGA CGCGCAGGCC
GGCTGGCATC GCGCGCAGCT CGACTTCTCG CAATCGATGA GCTACGGCGA TTACCTGTCG
CTCGACCCGA TCCTCGATGC GCAGCATCCG CGCTCGCCCG ATCACAACGA GATGCTGTTC
ATCATCCAGC ATCAGACGAG CGAGCTGTGG ATGAAGCTCG CGCTCTACGA GCTGCGCGCG
GCGCTCGCGT CGATCCGCGA CGACGCGCTG CCGCCCGCGT TCAAGATGCT CGCGCGCGTG
TCGCGCGTGC TCGAGCAGCT CGTGCAGGCG TGGAACGTGC TCGCGACGAT GACGCCGTCC
GAATACTCGG CGATGCGGCC GTATCTCGGC GCGTCGTCGG GCTTCCAGTC GTACCAGTAT
CGGGAGCTGG AGTTCATCCT CGGCAACAAG AACGCGCAGA TGCTGCGCCC GCACGCGCAC
CGGCCGGCGA TTCATGCGCA TCTGGAAGCG TCGCTGCAGG CGCCGTCGCT ATACGATGAA
GTGATTCGCC TGCTCGCGCG GCGCGGCTTT CCGATCGCGC CCGAGCGGCT CGACGCCGAC
TGGACGCAGC CGACGCGCCA CGATCGCACC GTCGAGGCCG CGTGGCTCGC GGTGTACCGC
GAGCCGAACG CGCACTGGGA GCTGTACGAG ATGGCCGAAG AGCTCGTCGA TCTCGAGGAC
GCGTTCCGCC AATGGCGCTT CCGCCACGTG ACGACGGTCG AGCGGATCAT CGGCTTCAAG
CAGGGCACGG GCGGCACGAG CGGCGCGCCG TATCTGCGCA AGATGCTCGA CGTCGTGCTG
TTCCCCGAAC TCTGGCACGT GCGCACGACG CTGTAG
|
|---|
| Protein sequence | MNSGHMQPPG DDAAPRCPFA GAHAPDAPHV PEAAGDDAQA GWHRAQLDFS QSMSYGDYLS
LDPILDAQHP RSPDHNEMLF IIQHQTSELW MKLALYELRA ALASIRDDAL PPAFKMLARV
SRVLEQLVQA WNVLATMTPS EYSAMRPYLG ASSGFQSYQY RELEFILGNK NAQMLRPHAH
RPAIHAHLEA SLQAPSLYDE VIRLLARRGF PIAPERLDAD WTQPTRHDRT VEAAWLAVYR
EPNAHWELYE MAEELVDLED AFRQWRFRHV TTVERIIGFK QGTGGTSGAP YLRKMLDVVL
FPELWHVRTT L
|
|---|
| |