| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_1046 |
|---|
| Symbol | xylB |
|---|
| ID | 3689298 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 1093898 |
|---|
| End bp | 1095379 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 637727502 |
|---|
| Product | xylulokinase |
|---|
| Protein accession | YP_332458 |
|---|
| Protein GI | 76811038 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
|---|
| TIGRFAM ID | [TIGR01312] D-xylulose kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTACCTCG GCATCGATCT CGGCACCTCC GAAGTGAAGG TGCTGCTGCT TTCGCCCGAC
GGCGCCGTCG TCGGCACGGC GGGCACGCCG TTTACCGTCG CGCGCGCGCA TCCGCGCTGG
GCCGAGCAGC ATCCGGACGA CTGGTGGGCC GGCACGCTCG CCGCGCTCGC CGCGCTGCGC
GCGCGCCATC CGCAGGCGTT CGCCGCGGTG CGCGGCATCG GGCTGTCCGG CCAGATGCAC
GGCGCGGTGC TGCTCGATAG CGGCGATCGC GTGCTGCGCC CCGCGATCCT GTGGAACGAC
ATGCGCAGCG CCGACGAATG CGCGCTGCTC GAAGCGCGCG CGCCCGAGCT GCATGCGATC
GCCGGCAACC TCGCGATGCC GGGCTTCACC GCGCCGAAGC TGCTGTGGGT CGCGCGGCAC
GAGCCCGATG TGTTCGGCCG GATCGCGTGC GTGCTGATGC CGAAGGATTA TCTGCGCCTG
AAACTCACGG GCGAGAAGGT GTCCGACCCG TCCGACGCGG CGGGCACGCT GTGGCTCGAC
GCGGCGCGCC GCGACTGGTC CGGCGCGCTG CTCGCCGCGG GCGGCATGAC GCGCGCGCAG
ATGCCGAGGA TCGTCGAAGG CAACGCGCCG TCCGGCACGC TGCGCGCGGA CGTCGCGCGC
GCGCTCGGCC TGGCCGAATC GGTGGTCGTC GCGGGCGGCG GCGGCGACAA CGCGACGAGC
GCGCTCGGCA TCGGCGCGAC CCAGCCCGGC GACGGCTTCG TGTCGCTCGG CACGTCGGGC
GTGCTGAGCG TCGTCGGCGA CCGCTTCCGG CCGAACCCGG CGTCGGCCGT CCATGCGTTC
TGCCATGCGA TTCCCGAGCG CTGGCAGCAG ATGAGCGTCG TGCTGTCGGC GGCGAGTTGC
CTGCGCTGGG TCTGCAAGCT CACGTCGACC GACGAGCCCG CGCTCCTTGC CGAAATCGCC
GCGCTCGATC CCGCCGCCCG CGAGAACGCG CCGCTCTTCC TGCCCTATCT GTCCGGCGAG
CGCACGCCGC ACAACGATCC GTACGCGCAA GGCGTGTTCT TCGGGATGAC GCACGGCACC
GAGCGCGCGC TGCTCGGCTA CGCGGTGCTC GAAGGCGTGA CGCTCGCGCT CGCCGACGGC
TTCGACGCGC TGATCGCGGG CGGCACGCAG ACCGACGCGC TCTCCCTGAT CGGCGGCGGC
GCGCGCAGCG CGTACTGGGC GCAACTGATC GCCGACGCGC TCGGCGTGCG CACGCGCCGC
CACGGCGGCG GCGAAACGGG CGCGGCGCTC GGCGCGGCGC GGCTGGGCTG GCTCGCGGTC
GGCGGCGCGC CGCGCGACGT GCTGGCGAAG CCGCCGCTGC GCGACGAATT CGCGCCCGAC
GCGGCGCGCC ACGCGGCGCT GCGCGCGCGG CTCGACGCGT TTCGCGCGCT GTACCGGCAC
GTGCGGCCGC TCTTCGAGCC GTCGCGCGCG CGGCTCGCGT GA
|
|---|
| Protein sequence | MYLGIDLGTS EVKVLLLSPD GAVVGTAGTP FTVARAHPRW AEQHPDDWWA GTLAALAALR
ARHPQAFAAV RGIGLSGQMH GAVLLDSGDR VLRPAILWND MRSADECALL EARAPELHAI
AGNLAMPGFT APKLLWVARH EPDVFGRIAC VLMPKDYLRL KLTGEKVSDP SDAAGTLWLD
AARRDWSGAL LAAGGMTRAQ MPRIVEGNAP SGTLRADVAR ALGLAESVVV AGGGGDNATS
ALGIGATQPG DGFVSLGTSG VLSVVGDRFR PNPASAVHAF CHAIPERWQQ MSVVLSAASC
LRWVCKLTST DEPALLAEIA ALDPAARENA PLFLPYLSGE RTPHNDPYAQ GVFFGMTHGT
ERALLGYAVL EGVTLALADG FDALIAGGTQ TDALSLIGGG ARSAYWAQLI ADALGVRTRR
HGGGETGAAL GAARLGWLAV GGAPRDVLAK PPLRDEFAPD AARHAALRAR LDAFRALYRH
VRPLFEPSRA RLA
|
|---|
| |