Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_1018 |
Symbol | |
ID | 3688360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | + |
Start bp | 1061894 |
End bp | 1063156 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637727474 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_332430 |
Protein GI | 76810945 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGTCG AACGGGTTCC ATACCGCTTA ATCACTGTCG CGACGGCTGC CGTTTTCCTG GCCGCGTGCG GAAAAAAAGA ATCGGCTCCG CCCCCTCAAA CGCCCGAAGT CGGCGTCGTC ACCGTCCAGC CGCAGTCCGT GCCGGTCGTC TCCGAACTGC CGGGCCGTAC GAGCGCCTAT CTGGTCGCGC AGGTGCGCGC ACGGGTCGAC GGCATCGTGT TGCGGCGCGA GTTCACGGAA GGCAGCGACG TCAAGGCCGG CCAGCGCCTG TACAAGATCG ATCCGGCACC CTATATCGCG CAATTGAACA GCGCGAAGGC GACGCTCGCG AAGGCGCAGG CGAACCTCGC GACGCAGAAC GCGCTCGTCG CGCGCTACAA GGTGCTCGTC GCCGCGAACG CGGTCAGCAA GCAGCAGTAC GACGATGCGG TGGCCGCGCA AGGGCAGGCG GCCGCCGACG TGGGCGCGGG CAAGGCCGCC GTCGAGACCG CGCAGATCAA CCTCGGCTAT ACGGATGTCG TCTCGCCGAT CACGGGCCGC GTCGGCATCT CGCAGGTCAC GCCGGGCGCG TACGTGCAGG CGAGCCAGGC GACGCTGATG TCGACCGTCC AGCAGCTCGA TCCGGTCTAC GTCGATCTCA CGCAGTCGAG CCTCGACGGC CTGAAGCTGC GCCAGGACAT CCAGAGCGGG CGCATCAAGA CGGAAGGCCC GGGCGCGGCG AAGGTCACGC TGATTCTCGA GGACGGCAAG CCGTACCCGG AGCGGGGCAA GCTGCAGTTC AGCGATGTCA CGGTCGACCA GACGACGGGC TCGGTCACGA TCCGCGCGAT CTTCCCGAAC AAGCAGCGCG TGCTGCTGCC GGGCATGTTC GTGCGCGCGC GCATCGAAGA GGGCGTCAAC GAGAACGCGT TCCTCGTTCC GCAGATCGGC GTCACGCACG ATCCGAAGGG CCAGGCGATC GCGATGATCG TCGACGGCAA GGGCAAGGTC GAGCCGCGCG TGCTGGTCAC GGGCGGCACG CAGGGCCAGA ACTGGGTGGT CGAGAGCGGC CTGCAGGCGG GCGACCGCGT GATCGTGCAG GGCATCGACA AGGTGCGCCC GGGCATGACC GTGAAGGCCG CCGAGGCTCA ACTGCCGGCC GCGGCGGCCG GCGCGTCGGG TGCCGCGCCC GCGGGCGGCT CGCCCGCCCA GGCCGCGGCG GCGAGCGCGG CCGCGTCGGG TGCCGCGCCG TCGAGCGCTG CCGCCGCGTC GAGCGCGCAA TAA
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Protein sequence | MRVERVPYRL ITVATAAVFL AACGKKESAP PPQTPEVGVV TVQPQSVPVV SELPGRTSAY LVAQVRARVD GIVLRREFTE GSDVKAGQRL YKIDPAPYIA QLNSAKATLA KAQANLATQN ALVARYKVLV AANAVSKQQY DDAVAAQGQA AADVGAGKAA VETAQINLGY TDVVSPITGR VGISQVTPGA YVQASQATLM STVQQLDPVY VDLTQSSLDG LKLRQDIQSG RIKTEGPGAA KVTLILEDGK PYPERGKLQF SDVTVDQTTG SVTIRAIFPN KQRVLLPGMF VRARIEEGVN ENAFLVPQIG VTHDPKGQAI AMIVDGKGKV EPRVLVTGGT QGQNWVVESG LQAGDRVIVQ GIDKVRPGMT VKAAEAQLPA AAAGASGAAP AGGSPAQAAA ASAAASGAAP SSAAAASSAQ
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