Gene BURPS1710b_1018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1018 
Symbol 
ID3688360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1061894 
End bp1063156 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content70% 
IMG OID637727474 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_332430 
Protein GI76810945 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTCG AACGGGTTCC ATACCGCTTA ATCACTGTCG CGACGGCTGC CGTTTTCCTG 
GCCGCGTGCG GAAAAAAAGA ATCGGCTCCG CCCCCTCAAA CGCCCGAAGT CGGCGTCGTC
ACCGTCCAGC CGCAGTCCGT GCCGGTCGTC TCCGAACTGC CGGGCCGTAC GAGCGCCTAT
CTGGTCGCGC AGGTGCGCGC ACGGGTCGAC GGCATCGTGT TGCGGCGCGA GTTCACGGAA
GGCAGCGACG TCAAGGCCGG CCAGCGCCTG TACAAGATCG ATCCGGCACC CTATATCGCG
CAATTGAACA GCGCGAAGGC GACGCTCGCG AAGGCGCAGG CGAACCTCGC GACGCAGAAC
GCGCTCGTCG CGCGCTACAA GGTGCTCGTC GCCGCGAACG CGGTCAGCAA GCAGCAGTAC
GACGATGCGG TGGCCGCGCA AGGGCAGGCG GCCGCCGACG TGGGCGCGGG CAAGGCCGCC
GTCGAGACCG CGCAGATCAA CCTCGGCTAT ACGGATGTCG TCTCGCCGAT CACGGGCCGC
GTCGGCATCT CGCAGGTCAC GCCGGGCGCG TACGTGCAGG CGAGCCAGGC GACGCTGATG
TCGACCGTCC AGCAGCTCGA TCCGGTCTAC GTCGATCTCA CGCAGTCGAG CCTCGACGGC
CTGAAGCTGC GCCAGGACAT CCAGAGCGGG CGCATCAAGA CGGAAGGCCC GGGCGCGGCG
AAGGTCACGC TGATTCTCGA GGACGGCAAG CCGTACCCGG AGCGGGGCAA GCTGCAGTTC
AGCGATGTCA CGGTCGACCA GACGACGGGC TCGGTCACGA TCCGCGCGAT CTTCCCGAAC
AAGCAGCGCG TGCTGCTGCC GGGCATGTTC GTGCGCGCGC GCATCGAAGA GGGCGTCAAC
GAGAACGCGT TCCTCGTTCC GCAGATCGGC GTCACGCACG ATCCGAAGGG CCAGGCGATC
GCGATGATCG TCGACGGCAA GGGCAAGGTC GAGCCGCGCG TGCTGGTCAC GGGCGGCACG
CAGGGCCAGA ACTGGGTGGT CGAGAGCGGC CTGCAGGCGG GCGACCGCGT GATCGTGCAG
GGCATCGACA AGGTGCGCCC GGGCATGACC GTGAAGGCCG CCGAGGCTCA ACTGCCGGCC
GCGGCGGCCG GCGCGTCGGG TGCCGCGCCC GCGGGCGGCT CGCCCGCCCA GGCCGCGGCG
GCGAGCGCGG CCGCGTCGGG TGCCGCGCCG TCGAGCGCTG CCGCCGCGTC GAGCGCGCAA
TAA
 
Protein sequence
MRVERVPYRL ITVATAAVFL AACGKKESAP PPQTPEVGVV TVQPQSVPVV SELPGRTSAY 
LVAQVRARVD GIVLRREFTE GSDVKAGQRL YKIDPAPYIA QLNSAKATLA KAQANLATQN
ALVARYKVLV AANAVSKQQY DDAVAAQGQA AADVGAGKAA VETAQINLGY TDVVSPITGR
VGISQVTPGA YVQASQATLM STVQQLDPVY VDLTQSSLDG LKLRQDIQSG RIKTEGPGAA
KVTLILEDGK PYPERGKLQF SDVTVDQTTG SVTIRAIFPN KQRVLLPGMF VRARIEEGVN
ENAFLVPQIG VTHDPKGQAI AMIVDGKGKV EPRVLVTGGT QGQNWVVESG LQAGDRVIVQ
GIDKVRPGMT VKAAEAQLPA AAAGASGAAP AGGSPAQAAA ASAAASGAAP SSAAAASSAQ