Gene BURPS1710b_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_1008 
Symbol 
ID3691172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand
Start bp1051736 
End bp1052653 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content65% 
IMG OID637727464 
Productsterol desaturase family protein 
Protein accessionYP_332420 
Protein GI76808619 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTCA ACGTCGAATT GCTTCTGCTC GCGCTCGCGC CCGTCTTCCT GCTCTGCATC 
GGCTGGGAAG CGTGGCATCT CGCGCGCACG CGCCCCGGCG AGCACGTCTA CAACCTGCGC
GACACGCTCT GCAACGCGGC GCTCGCGCTG ATGCACCAGG GCGCGGACAA GATCGCGTGG
ATCTTCGTGA TCCCGGTCTA TGCGTACTGC TACGCGCATT ACCGGCTCGT CACGTGGGAC
GCCACGTGGA TCGCGTTCGC CGTGCTGTTC GTCGCGCAGG ATCTGCTCTA CTACGTGTTC
CATCGCTGCA GTCACCGCGT GCGCTGGCTG TGGGCCGCGC ACGTCGTTCA CCATTCGTCC
GAACGCCTGA ATTTCTCGAC CGCGATGCGG CAAAGCCTGA TGTATCCGAT CGCCGGCATG
TGGGCGTTCT GGCTGCCGCT CGCGTTTCTC GGCTTCCCGC CGCAGCAGAT CGTCGGCATC
GTGCTCATCA ATCTCGCGTT CCAGTTCTTC GTCCATACGC AGACGATTCC GAAGCTCGGC
TGGCTCGAAT ACGTGCTGAA CACGCCGTCG ATCCACCGCG CGCACCATGC GCGCAACCCG
CGCTACATCG ATCGCAATTA CGCCGGCGTG CTCGTGATCT GGGATCGCCT GTTCGGCAGC
TACGTCGACG AGGACCCGCG CGATCCGCCC GAATACGGGA TCGTCGAGCC GCTGCGCTCG
AACAATCCGC TTGTCGCGAC GTTCCATGAA TGGCGCTCGA TGGCGGCGGA CGCGATCGGC
GTCGAAGGCT GGCGCAACAA GCTGCGTGCG GTTTTCGGTC CACCCGAATG GGCGAGCGCT
TATCATGCTC GGGTTGCGCA CGCGCGCGCG CAATCGGACG AGCCGCCCGC GCTCGCCGCC
GCGCCTCGCG AACGATAA
 
Protein sequence
MQFNVELLLL ALAPVFLLCI GWEAWHLART RPGEHVYNLR DTLCNAALAL MHQGADKIAW 
IFVIPVYAYC YAHYRLVTWD ATWIAFAVLF VAQDLLYYVF HRCSHRVRWL WAAHVVHHSS
ERLNFSTAMR QSLMYPIAGM WAFWLPLAFL GFPPQQIVGI VLINLAFQFF VHTQTIPKLG
WLEYVLNTPS IHRAHHARNP RYIDRNYAGV LVIWDRLFGS YVDEDPRDPP EYGIVEPLRS
NNPLVATFHE WRSMAADAIG VEGWRNKLRA VFGPPEWASA YHARVAHARA QSDEPPALAA
APRER