| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0929 |
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| Symbol | choS |
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| ID | 3689707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 966667 |
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| End bp | 968427 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637727385 |
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| Product | cholesterol oxidase |
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| Protein accession | YP_332342 |
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| Protein GI | 76810583 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGA TCCTCGGAGA TCCGGCGTCG CGTCGCGAGC GCCGCGCGTT TCTCGGCGAC
GTCGCGCGTC TCGCGGGCGC GGGCATCATC GCCGGATGGA CGCCGATTCG ACCGATTGCC
GCGCACGCGC AAGCCGCGGG CGCGGCGCCG CCGAATTTTC CCGCCGGCAT CGCGCTCTAC
AAACAGGCGT TTCGCAACTG GAGCGGCGAG ATCGCGGTCG CGGACCTGTG GACCGCCGCG
CCCGCGACGC CCGCCGACGT CGTCGCGATC GTCAACTGGG CGGCCGACAA CGGTTACCGC
GCGCGGCCGC TCGGCCATAT GCACAACTGG TCGCCGCTCA CGGTCGCCGC GAACGGCGCG
CACGAGCGCA CGCTGCTCGT CGACACGACG AGGCATCTGT GCGCCGTATC CGTCGACCCG
TCGACGACGC CCGCGCGCGT CGTCGCACAA GCGGGCGTGT CGCTCGATAC GCTGCTCGCG
ACGCTCGAGC AGCACGGGCT CGGGTTGACC GCGGCGCCCG CGCCCGGCGA CATCACGCTC
GGCGGCGCGC TCGCGATCGG CGCGCACGGC ACCGCGCTGC CGGCGGCGAA CGAGACGCGG
CCGCCCGGGC ATACGTACGG CTCGCTCAGC AACGCGGTGC TCGCGCTGAC CGCGGTGGTC
TATGACGCGG CGTCGGGCCG CTACGCGTTG CGCACCTTCG ATCGCACCGA TCCGGACATC
GGCCCGTTCC TCGCGCACGT CGGCCGCGCG TTCGTCGTCG AGGCGACGTT GCAGGTCGGC
GCGAATCAAC GGCTGCAATG CGAGAGCTTC GTCGATATCC CCGCCGCCGA GCTATTCGCC
GCGGCGGGCA CGCGGGGCCG CACCGTCGAA TCGTTCGTGC AGCGCTCGGG CCGCATCGAG
GCGATCTGGT TTCCATTCAC CGACTATCCG TGGCTGAAGG TCTGGACCGT CCGGCCGAAC
CGGCCGTCGG GCGCGCGTGT CGTCGAAGAG CCGTACAACT ACCCGTTTTC CGATTCGATA
TCGCGAGAGC TGTCCGATCT GGTCAGCCGC ATCGTACTGA ACGGCGAAAT CCAGTTGGCA
CCGCTCTTCG GAAAAACGCA GTACACGATT GCGTATCTCG GCCTCACCAA CATCTTCCGG
CCACTGACGA ACCTGTGGGG CTGGTCGCGC TCGGTGCTGC ACTACGTGCG CCCGACGACG
CTGCGCGTGA CCGCGAACGG CTACGCGGTG CTCACGCGTC GCGAGAACGT GCAGCGCGCG
ATCAACGAGT TCGTCGGCGC GTATCGGCAG CGGGTCGCCG CCTATCGCGC GGCGGGCCGC
TACCCGATGA ACGGCCCCAT CGAGATCCGC GTGACGGGCG TCGATACGCC CGACGACGTC
GGCCGCGGCG CGGTGCCGCC GTCGTTATCC GCGATCCGCC CGCGTCCCGA CCATCCCGAA
TGGAACGCCG CGATCTGGTT CGACATCCTG ACGATACCGG GCACGCCCGA TGCGAACCGC
TTCTATCGCG AGATCGAGCA GTGGATGCTG TCGAACTACA GCGGCGATTA CGCGACCGTG
CGCCCGGAAT GGTCGAAGGG CTGGGGCTAC GCGGACACCG CCGCATGGAG CGACGACGCG
ATGCTCCGCA CGACGATCCC GGACCTGTTC CGCCAGGGGC TCTCGTCCGC CGACGACTGG
GACGCCGCGC TGCGCACGCT CGAGCGCTAC GATCCGCGGC GCGTGTTCTC GTCGCCGCTG
CTCGACCGGC TGATGGGCTG A
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| Protein sequence | MKKILGDPAS RRERRAFLGD VARLAGAGII AGWTPIRPIA AHAQAAGAAP PNFPAGIALY
KQAFRNWSGE IAVADLWTAA PATPADVVAI VNWAADNGYR ARPLGHMHNW SPLTVAANGA
HERTLLVDTT RHLCAVSVDP STTPARVVAQ AGVSLDTLLA TLEQHGLGLT AAPAPGDITL
GGALAIGAHG TALPAANETR PPGHTYGSLS NAVLALTAVV YDAASGRYAL RTFDRTDPDI
GPFLAHVGRA FVVEATLQVG ANQRLQCESF VDIPAAELFA AAGTRGRTVE SFVQRSGRIE
AIWFPFTDYP WLKVWTVRPN RPSGARVVEE PYNYPFSDSI SRELSDLVSR IVLNGEIQLA
PLFGKTQYTI AYLGLTNIFR PLTNLWGWSR SVLHYVRPTT LRVTANGYAV LTRRENVQRA
INEFVGAYRQ RVAAYRAAGR YPMNGPIEIR VTGVDTPDDV GRGAVPPSLS AIRPRPDHPE
WNAAIWFDIL TIPGTPDANR FYREIEQWML SNYSGDYATV RPEWSKGWGY ADTAAWSDDA
MLRTTIPDLF RQGLSSADDW DAALRTLERY DPRRVFSSPL LDRLMG
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