| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0905 |
|---|
| Symbol | glpF |
|---|
| ID | 3689244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 939646 |
|---|
| End bp | 940362 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637727361 |
|---|
| Product | glycerol uptake facilitator protein |
|---|
| Protein accession | YP_332318 |
|---|
| Protein GI | 76811238 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0580] Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) |
|---|
| TIGRFAM ID | [TIGR00861] MIP family channel proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACCAT ACATCGCGGA GTTCATCGGC ACGGCGCTGC TCGTGCTGCT CGGCAACGGC
GCCGTTGCGA ACGTGCTGCT CGCGAAAACC AAAGGCAAGG GCGCGGACCT CATCGTCATC
GTGATGGGTT GGGCGATGGC GGTATTCGTC GCGGTCTACG TAACCGCATC GTTCTCCGGC
GCGCACCTGA ATCCGATCGT CACGATCAGC CTCGCGCTCG CGGGCAAGTT CGCATGGGCG
AAGGTGGGCG GCTACGTCGC ATCGCAGATG CTCGGCGGCA TGGCGGGCGC GTTCCTCGTG
TGGCTCGCGT ATCGCCAGCA CTTCGCGAAG GAGGCCGATC CCGATCTGAA GCTCGCCGTG
TTCTGCACCG CGCCCGCGAT CCGCAGCGTC ACGCACAACG TGTTGACGGA GGCGATCTGC
ACTTTCGTGC TGATCCTCGG CGTGCTGTAT CTCGCGTCGC CGCAAGTCGG CCTGGGCGCG
CTCGACGCGC TGCCCGTCGG CCTGCTCGTA CTCGGCATCG GCATCTCGCT CGGCGGCCCG
ACGGGCTACG CGATGAGCCC CGCGCGCGAC CTGTCGCCGC GCATCATGCA CGCGCTGCTG
CCGATTCCCG GCAAGCGCGA TAGCGACTGG CGCTATGCAT GGGTGCCGGT GCTCGGGCCG
CTCGTCGGCG GCGTGCTCGC GGCGAACCTG TACCTGTATC TGCATACGAC GCACTGA
|
|---|
| Protein sequence | MSPYIAEFIG TALLVLLGNG AVANVLLAKT KGKGADLIVI VMGWAMAVFV AVYVTASFSG
AHLNPIVTIS LALAGKFAWA KVGGYVASQM LGGMAGAFLV WLAYRQHFAK EADPDLKLAV
FCTAPAIRSV THNVLTEAIC TFVLILGVLY LASPQVGLGA LDALPVGLLV LGIGISLGGP
TGYAMSPARD LSPRIMHALL PIPGKRDSDW RYAWVPVLGP LVGGVLAANL YLYLHTTH
|
|---|
| |