| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0887 |
|---|
| Symbol | |
|---|
| ID | 3691893 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 922331 |
|---|
| End bp | 923143 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637727343 |
|---|
| Product | unkown domain/putative metalloprotease fusion protein |
|---|
| Protein accession | YP_332300 |
|---|
| Protein GI | 228969302 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0319] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0971862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGT CCCGTTCCTC CAAGCCCGCG CGCGCCGAAG CGGCGCAACC CGCGTCTCCC
CGCCTGTCGC TGTTCGACGC GAAAGGCAAA GTCAAGACGG TCGAAGCCCA GGCGCTGCGC
ATCGACTTCG CCGATGGCCG CAGCCTGATG TTCGACCTGT CCGGCAGTTC GGGCGACGCG
GCCGTCGCGA TCGTCGCGCA GCACGCGGAC CCGTCGCTGC GCGCGACGAT CACGCTGCGC
CCCGAGCACT ACGATAGCGT GACGGTCGAG GTCGGCGCCG ACGAGAACCC GGACTTCGCG
CACGACGAAA CAGACGGCGC TGGCGACGAG AGCGACGACG AAGACGCGCA GGGTCGCGAT
CCCGAGCTCG ACCTCGCGGT GCAGTACGGC GACGAGATCG GCGATGCGCA GCGCAAGTCG
CTGCCCAAGC GCAAGGTGAT CGCCGAATGG CTCGAGCCCG CGATCTTCTC CGACACGCAG
TTCACCGTGC GCTTCGTCGG CGCCGACGAG GGCCGCGCGC TCAACCATAG CTACCGGCAC
AAGGACTACG CGACGAACGT GCTGACGTTC GCGTACGGCG AGGAGCCGGA CGGCGTGACG
GTCGCGGATC TCGTGCTGTG CTGCCCCGTC GTCGAAAAGG AAGCGCGCGA GCAGGGCAAG
ACGCTCGTCG CGCATTACGC GCATCTGCTC GTGCACGGCG CGCTGCACGC GCAGGGCTAC
GACCACGAAC GCGGCGAAGA GGACGCAGCC GAGATGGAAG CGCTCGAAAT CGACATCCTC
GCGAAGCTCG GCTTCCCGAA TCCATACCGC TGA
|
|---|
| Protein sequence | MKSSRSSKPA RAEAAQPASP RLSLFDAKGK VKTVEAQALR IDFADGRSLM FDLSGSSGDA
AVAIVAQHAD PSLRATITLR PEHYDSVTVE VGADENPDFA HDETDGAGDE SDDEDAQGRD
PELDLAVQYG DEIGDAQRKS LPKRKVIAEW LEPAIFSDTQ FTVRFVGADE GRALNHSYRH
KDYATNVLTF AYGEEPDGVT VADLVLCCPV VEKEAREQGK TLVAHYAHLL VHGALHAQGY
DHERGEEDAA EMEALEIDIL AKLGFPNPYR
|
|---|
| |