| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0767 |
|---|
| Symbol | |
|---|
| ID | 3690416 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 778827 |
|---|
| End bp | 779492 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637727223 |
|---|
| Product | OstA-like family protein |
|---|
| Protein accession | YP_332180 |
|---|
| Protein GI | 76809285 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAT CGTTCCCCTG TTTATTTCCG AGCGGCGCAC GCCGCGCCGC GCGCGCGATG
GTCGCGGCGG CGCTCGTCGC GGCGCCGCTC GCGGGCCTCG CGCCCGCAGC CCACGCCGAA
AAGGCCGACC GCGACAAGCC AATCAACGTC GAAGCGGACA ACCTGACCTA TGACGACCTG
AAACAGGTCA CCGTCGCGAC GGGCAACGTC GTCATCACGA AGGGCACGAT CCTGATCAAG
GGCGATCGCG TCGAAGTGCG CCAGGACCCG CAGGGCTACC AGTACGCGAC GGCGACGGCC
TCCGGCAAGA AACACGCGTC GTTCCGCCAG AAGCGCGAAG GCCTCGACGA ATACATCGAC
GGCGACGCCG AGCGGATCGA CTACGACGGC AAGCAGGATC TGACCACGCT CACGACGAAC
GCGACCGTGC GCCGCCTGCA GGGCGTGTCG ACCGTCGCCG ACACGGTGCA CGGCAGCGTG
ATCACGTACG ACGGCCAGCG CGATTTCTAC ACGGCGCGCG GCGGCAAGGA CGTCGCCGGC
CCCGGCAACC CGGGCGGGCG CGTGCGCGCG ATGCTCACGC CGAAGAACAG CGGCCCGGCG
CCGCTGTCCG GCGGCCCCGC GCAGCTCGCG CCGTCGAACG ACATGCAGGG AGCGCCCAAC
CCGTGA
|
|---|
| Protein sequence | MNESFPCLFP SGARRAARAM VAAALVAAPL AGLAPAAHAE KADRDKPINV EADNLTYDDL
KQVTVATGNV VITKGTILIK GDRVEVRQDP QGYQYATATA SGKKHASFRQ KREGLDEYID
GDAERIDYDG KQDLTTLTTN ATVRRLQGVS TVADTVHGSV ITYDGQRDFY TARGGKDVAG
PGNPGGRVRA MLTPKNSGPA PLSGGPAQLA PSNDMQGAPN P
|
|---|
| |