Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0740 |
Symbol | nirD-1 |
ID | 3690016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 755405 |
End bp | 755800 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637727196 |
Product | nitrite reductase (NAD(P)H), small subunit |
Protein accession | YP_332154 |
Protein GI | 76811480 |
COG category | [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
TIGRFAM ID | [TIGR02378] nitrite reductase [NAD(P)H], small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCCA CCCAACCCGA ATGGATCGCC GTCTGCCGAC TGGACGACAT CCCGCCGCTC GGCGCACGCG TCCTCACGCG CGAGGCCGGC ACGCCGATCG CCCTCTTTCG CACCGCGAGC GACGCGGTGT TCGCGCTCCT CGACCGCTGC CCGCACAAGG GCGGCCCGCT GTCGCAGGGG ATCGTTCACG GCGAGCAGGT CACGTGTCCG CTGCACGGCT TCAATGTCGC ATTCTCGAGC GGCTGCGCGC TGCCGCCCGA CGAAGGCTGC ACGAGCGTCT TCAGCGTGAA GCGCGACGGC GACACGGTGC TGCTCGAGCG CACCGAGCTC GCGACGCTCG GCGTCGACGA CGCGGCGCAG CCGGCTGCGC TCGCATCGCC GGGCGCAGCC GCATGA
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Protein sequence | MSATQPEWIA VCRLDDIPPL GARVLTREAG TPIALFRTAS DAVFALLDRC PHKGGPLSQG IVHGEQVTCP LHGFNVAFSS GCALPPDEGC TSVFSVKRDG DTVLLERTEL ATLGVDDAAQ PAALASPGAA A
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