Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BURPS1710b_0729 |
Symbol | cydA |
ID | 3688309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia pseudomallei 1710b |
Kingdom | Bacteria |
Replicon accession | NC_007434 |
Strand | - |
Start bp | 743075 |
End bp | 744670 |
Gene Length | 1596 bp |
Protein Length | 531 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637727185 |
Product | cytochrome d ubiquinol oxidase subunit I |
Protein accession | YP_332143 |
Protein GI | 76808671 |
COG category | [C] Energy production and conversion |
COG ID | [COG1271] Cytochrome bd-type quinol oxidase, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0163663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAGTA GCGAAGTCGT CGATCTGTCG CGTCTGCAGT TCGGCATCAC AGCGCTCTAC CATTTCCTGT TCGTTCCGCT CACGCTCGGC ATGTCCTGGC TGCTCGTCAT CATGGAAGCC GTCTACGTGA TGACGGGCAA GCAGGTCTAC AAGGACATGA CCCAGTTCTG GGGCAAGCTC TTCGGGATCA ACTTCGCGAT GGGCGTGACG ACGGGCATCA CGCTCGAATT CCAGTTCGGC ACGAACTGGT CGTACTACTC GCACTACGTC GGCGACATCT TCGGCGTGCC GCTCGCCGTC GAAGGGCTGA TGGCGTTCTT CCTCGAATCG ACGTTCGTCG GCCTGTTCTT CTTCGGCTGG AACCGGCTGT CGAAGGTCCA GCATCTGGTC GTCACGTTCC TCGTCGCGCT CGGCTCGAAC CTGTCCGCGC TGTGGATCCT CGTCGCGAAC GGCTGGATGA ACAATCCGGT CGGCGCCGAG TTCAACTACC AGACGATGCG CATGGAGCTC GCGAACCTGT TCGACGTGCT CTTCAACCCG GTCGCGCAGG TGAAGTTCGT GCACACGGTG TCGGCGGGCT ACGTGACGGC CGCGATGTTC GTGCTCGGCG TGTCCGCGTG GTATCTGCTG AAGAAGCGCG ACGTCGACTT CGCGCTGCGC TCGTTCGCGA TCGCCGCGGG CTTCGGCCTC GCGTCGACGC TCTGCGTGAT CGTGCTCGGC GACGAATCGG GCTACACGAC GGGCGAAGTG CAGAAGATGA AGCTCGCCGC GATCGAATCC GAATGGGAAA CGCAGCCCGC GCCCGCGTCG TTCACGCTGA TCGGGCTGCC GAACCAGGAG GCGGAGCGCA CCGATTACGC GATCAAGATC CCGTACGCGC TCGGCCTCAT CGCGACGCGC TCGGTCAGCG AGCCGGTGAT CGGCCTGCGC GAACTCGCCA AGCGCAGCGA GGAGCACATC CAGAGCGGCA TGATCGCGTA CGGCGCGCTG CAGAAGCTGA AGGCGGGCGA CACGAGCGCC GAGACGAAGG CGACGTTCGA TCAGCACAAG CAGTATCTCG GCTACGGCCT GATGCTCAAG CAGTTCACGC AGAACGTGAC CGACGCGACG CCGGACCAGA TCAAGGCCGC GGCGAAGCAG ACGATTCCGC CCGTCGCGCC CGTGTTCTTC TCGTTCCGCA TCATGGTGTT CCTCGGCTTC CTGTTCCTCG CGACCTTCAT CGCCGCGTTC TGGTTCTGCG CGCGCCGCCA GTTGCTGCAG GACAACCGCC GCTGGTTCCT GCGCTATGCG GTGTGGGCGA TTCCGCTGCC GTGGCTCGCC GCCGAGTTCG GCTGGGTCGT CGCCGAAGTG GGCCGCCAGC CGTGGACGAT CGCGGGCATC CTGCCGACGC ACCTGTCCGC GTCGAGCCTC ACGGCAACCG ATCTGTACCT GAGCCTCGCG GGCTTCATCG TGTTCTACAC GGCGCTCTTC ATCATCGAGA TCACGCTGAT GTTCAAGTAC GCGCGCCTCG GCCCGTCGTC GCTGCACACC GGCCGCTATC ACCACGAACA GGCAGGGCGG CCGCTCGAGA AGGCCGTCGC GGGCACGGCC GCGTGA
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Protein sequence | MISSEVVDLS RLQFGITALY HFLFVPLTLG MSWLLVIMEA VYVMTGKQVY KDMTQFWGKL FGINFAMGVT TGITLEFQFG TNWSYYSHYV GDIFGVPLAV EGLMAFFLES TFVGLFFFGW NRLSKVQHLV VTFLVALGSN LSALWILVAN GWMNNPVGAE FNYQTMRMEL ANLFDVLFNP VAQVKFVHTV SAGYVTAAMF VLGVSAWYLL KKRDVDFALR SFAIAAGFGL ASTLCVIVLG DESGYTTGEV QKMKLAAIES EWETQPAPAS FTLIGLPNQE AERTDYAIKI PYALGLIATR SVSEPVIGLR ELAKRSEEHI QSGMIAYGAL QKLKAGDTSA ETKATFDQHK QYLGYGLMLK QFTQNVTDAT PDQIKAAAKQ TIPPVAPVFF SFRIMVFLGF LFLATFIAAF WFCARRQLLQ DNRRWFLRYA VWAIPLPWLA AEFGWVVAEV GRQPWTIAGI LPTHLSASSL TATDLYLSLA GFIVFYTALF IIEITLMFKY ARLGPSSLHT GRYHHEQAGR PLEKAVAGTA A
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