Gene BURPS1710b_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBURPS1710b_0680 
Symbol 
ID3691440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia pseudomallei 1710b 
KingdomBacteria 
Replicon accessionNC_007434 
Strand+ 
Start bp689197 
End bp689838 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content68% 
IMG OID637727136 
ProductSco1 
Protein accessionYP_332094 
Protein GI76810837 
COG category[R] General function prediction only 
COG ID[COG1999] Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.235059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACTT CCCGTCCGAC GCGGCCGCAA GACGGCCGGC AAGCGGAACC CGCGCAGCGC 
GGCTCGTGGC GGCGCGGCCG CTGGGTGCTG CTCGCGCTCG CGCTCGTGTG CGCGGCGCCC 
GTGATCGCGT CGTATTTCAC GTATTACGTG ATCAAGCCGC GCGGCGGCGC GACCAACTAC 
GGCACGCTGA TCGAGCCGCA GCGGCCGATC CCGCCCGATC TGAGCGTCGT CGACGAAACG 
GGCAGGACGA TACCGCTCGC GTCGCTGCGC GGCGTGTGGC TGTTCGTGAT GGAGGACGGC 
GGCGCATGCG ACGACGCATG CGCGAAAAAG CTGTATTTCA TGCGCCAGGT GCGTGCGACG 
CAAGCGGGCG AGCGGCACCG GATCACGATG GTGTGGCTCA AGAGCGATGC GGCGAACGTG 
CCGGCGGCGA TCGCCGACGC GTATCCGGAC ACGCGCAAGC TGCGCGCCGA TCCGGCCGCG 
GTCGCCGCGT GGCTGCCGGC CGACGCGGGC ACGCGGGTGA CCGATCACCT TTATCTCGTC 
GATCCGAACG GCAACCTGAT GATGCGTTTC CCGAAGAACC CGGATCCGAG CAGGATCAAG 
CAGGACGTGA CGAAGCTGCT CAAGTGGTCG AGCATCGGTT GA
 
Protein sequence
MQTSRPTRPQ DGRQAEPAQR GSWRRGRWVL LALALVCAAP VIASYFTYYV IKPRGGATNY 
GTLIEPQRPI PPDLSVVDET GRTIPLASLR GVWLFVMEDG GACDDACAKK LYFMRQVRAT 
QAGERHRITM VWLKSDAANV PAAIADAYPD TRKLRADPAA VAAWLPADAG TRVTDHLYLV 
DPNGNLMMRF PKNPDPSRIK QDVTKLLKWS SIG