| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0673 |
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| Symbol | ctaD |
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| ID | 3689947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | + |
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| Start bp | 684307 |
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| End bp | 685914 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637727129 |
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| Product | cytochrome c oxidase polypeptide I |
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| Protein accession | YP_332087 |
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| Protein GI | 76811938 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0425547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGCA TCGGGCACGA CGTAGCCGCG GGCCACGCGC ACGACGACCA CGCGCACGAA
ACCCCGCACG GCTGGCGGCG CTGGCTGTTC GCCACCAACC ACAAGGATAT CGGTACGCTG
TACCTGCTGT TCTCGTTCAT CATGTTCCTG TCGGGCGGCG TGATGGCGCT CGCGATTCGC
GCCGAGCTGT TCGAGCCGGG CCTGCAGATC ATGCGGCCCG AGTTCTTCAA TCAGCTCACG
ACGATGCACG GGCTGATCAT GGTGTTCGGC GCGATCATGC CGGCCTTCGT CGGTTTCGCG
AACTGGATGA TTCCGCTGCA GATCGGCGCG TCGGACATGG CGTTCGCGCG GATGAACAAC
TTCAGCTTCT GGCTGCTGCC GGTGGCGGCG GTGCTGCTCG TCGGCTCGTT CTTCTCGCCG
GGCGGCGCGA CGGCCGCCGG CTGGACGCTG TATGCGCCGC TGTCGACGCA GATGGGCCCG
GGCATGGACT TCGCGATCTT CGCGGTGCAC ATCATGGGCG CGTCGTCGAT CATGGGCGGG
ATCAACATCG TCGTGACGAT CCTGAACATG CGCGCGCCGG GCATGACGCT GATGAAGATG
CCGATGTTCG CGTGGACGTG GCTCATCACC GCGTACCTGC TGATCGCCGT GATGCCGGTT
CTGGCGGGCG CGATCACGAT GGTGCTGTTC GACCGTCACT TCGGCACGTC GTTCTTCAAC
GCGGCGGGCG GCGGCGATCC GGTGATGTAT CAGCACATCT TCTGGTTCTT CGGCCACCCC
GAGGTGTACA TCATGATTCT GCCGGCGTTC GGGATCGTGT CGCAGGTGAT CCCGGCGTTC
GCGCGCAAGC CGCTCTTCGG CTACAGCTCG ATGGTGTACG CGACCGCGTC GATCGCGATC
CTGTCGTTCA TGGTCTGGGC GCACCACATG TTCGTGACCG GCATGCCGGT GACGGGCCAG
CTGTTCTTCA TGTACGCGAC GATGCTGATC GCGGTGCCGA CGGGCGTGAA GGTGTTCAAC
TGGCTCGCGA CGATGTGGCG CGGCTCGCTC ACGTTCGAGA CGCCGATGCT GTTCGCGATC
GGCTTCCTGT TCGTGTTCAC GATGGGCGGT TTCACGGGCC TGATGCTCGC GATGGCGCCG
CTCGACATCC AGTACCACGG TACGTACTTC GTCGTCGCGC ACTTCCATTA CGTGCTCGTC
GCGGGGTCGC TGTTCGCGCT CTTCGCCGGC TGGTACTACT GGGCGCCGAA ATGGACCGGC
TGGATGTACA ACGAGACGCG CGGGAAGATC CACTTCTGGG CGTCGATGAT CTTCTTCAAC
GTCACGTTCT TCCCGATGCA CTTCGTCGGC CTCGCGGGCA TGCCGCGCCG CTATGCGGAC
TACCCGGCGC AGTTCACCGA TTTCAATCAG CTCGCGACGA TCGGCGCATT CGGCTTCGGC
CTCGCGCAGG TGTACTTCCT GTTCGCGATC GTGCTGCCCG CGTATCGCGG CGGCGGCGAG
CTCGAGCGCG CATCCGACAA GCCGTGGGAC GGCGCGACGG GCCTCGAGTG GACGGTGCCG
AGCCCGGCTC CGTTCCACAC GTTCGAGCAT CCGCCGACGG TCGAGTAA
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| Protein sequence | MSSIGHDVAA GHAHDDHAHE TPHGWRRWLF ATNHKDIGTL YLLFSFIMFL SGGVMALAIR
AELFEPGLQI MRPEFFNQLT TMHGLIMVFG AIMPAFVGFA NWMIPLQIGA SDMAFARMNN
FSFWLLPVAA VLLVGSFFSP GGATAAGWTL YAPLSTQMGP GMDFAIFAVH IMGASSIMGG
INIVVTILNM RAPGMTLMKM PMFAWTWLIT AYLLIAVMPV LAGAITMVLF DRHFGTSFFN
AAGGGDPVMY QHIFWFFGHP EVYIMILPAF GIVSQVIPAF ARKPLFGYSS MVYATASIAI
LSFMVWAHHM FVTGMPVTGQ LFFMYATMLI AVPTGVKVFN WLATMWRGSL TFETPMLFAI
GFLFVFTMGG FTGLMLAMAP LDIQYHGTYF VVAHFHYVLV AGSLFALFAG WYYWAPKWTG
WMYNETRGKI HFWASMIFFN VTFFPMHFVG LAGMPRRYAD YPAQFTDFNQ LATIGAFGFG
LAQVYFLFAI VLPAYRGGGE LERASDKPWD GATGLEWTVP SPAPFHTFEH PPTVE
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