| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0594 |
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| Symbol | metH |
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| ID | 3689636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia pseudomallei 1710b |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007434 |
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| Strand | - |
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| Start bp | 608170 |
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| End bp | 610887 |
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| Gene Length | 2718 bp |
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| Protein Length | 905 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637727050 |
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| Product | methionine synthase |
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| Protein accession | YP_332008 |
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| Protein GI | 76809439 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.52198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGACC ACACGATGCG CCTAGCCGGC CTCGAGCCGT TCAACGTCAC GTCCGGGACG
CTCTTCATCA ACGTCGGCGA ACGCACCAAC GTCACCGGCT CGAAGGCGTT CGCGCGCATG
ATCCTCAACG GCCAGTTCGA CGAGGCGCTC GCGGTCGCGC GCCAGCAGGT CGAGAACGGC
GCGCAGGTGA TCGACGTCAA CATGGACGAG GCGATGCTCG ATTCGAAGGC GGCGATGGTG
CGCTTCCTGA ACCTGATCGC ATCCGAGCCG GACATCGCGC GCGTGCCGAT CATGATCGAT
TCGTCGAAGT GGGACGTGAT CGAGGCGGGC CTGAAGTGCG TGCAGGGCAA GGCGATCGTC
AACTCGATCT CGCTGAAGGA AGGCAAGGAA GCGTTCGTGC ATCACGCGAA GCTGATCCGC
CGCTACGGCG CCGCGGCCGT CGTGATGGCG TTCGACGAAG CGGGCCAGGC CGACACGCTC
GCACGCAAGA CCGAGATCTG CAAGCGCTCG TACGACGTGC TCGTGAACGA AGTCGGCTTC
GCGCCCGAGG ACATCGTCTT CGATCCGAAC ATCTTCGCGG TGGCGACGGG CATCGACGAG
CACAACAACT ACGCGGTCGA CTTCATCGAG GCGACCCGCT GGATCAAGCG CAACCTGCCG
TACGCGAAGG TGAGCGGCGG CGTGTCGAAC GTGTCGTTCT CGTTTCGCGG CAACGATCCC
GTGCGCGAGG CGATCCACAC CGTGTTCCTC TATCACGCGA TCCAGGCGGG GATGGACATG
GGCATCGTCA ACGCGGGCCA GCTGGGCGTG TACGCGGAGC TCGACGCCGA GCTGCGCGAA
CGCGTCGAGG ACGTGATCCT CAACCGCCGC GACGATTCGA CCGACCGGCT GCTCGAGATC
GCCGACAAGT TCAAGACCGG CGCCGCGAAG AAGGAAGAGA ACCTCGAATG GCGCAGCCAG
CCGGTCGAGA AGCGGCTCGC GCACGCGCTC GTGCACGGCA TCACGAACTT CATCGTCGAG
GATACCGAAG AAGCGCGCGC GAAGATCGCC GCGGCGGGCG GGCGCCCGAT CAACGTGATC
GAAGGCCCGC TGATGGACGG GATGAACATC GTCGGCGACC TGTTCGGCCA GGGCAAGATG
TTCCTGCCGC AGGTGGTGAA ATCCGCGCGC GTGATGAAAC AGGCCGTCGC GCACCTGATC
CCGTTCATCG AGGAAGAGAA GCGCCTGCTC GCGCAAGCGG GCGGCGACGT GCGCGCGAAG
GGCAAGATCG TCATCGCGAC CGTGAAGGGC GACGTGCACG ACATCGGCAA GAACATCGTG
TCGGTCGTGC TTCAGTGCAA CAACTTCGAA GTGGTCAACA TGGGCGTGAT GGTGCCGTGC
AACGAGATCC TCGCGAAGGC GAAGGTCGAG GGCGCGGACA TCGTCGGGCT GTCCGGCCTC
ATCACGCCGA GCCTCGAGGA AATGGCGTAC GTCGCCTCCG AGATGCAGCG CGACGACTAC
TTCCGCGTGA AGAAGATTCC GCTGCTGATC GGCGGCGCGA CGACCTCGCG CGTGCACACG
GCCGTGAAGA TCGCGCCGCA CTACGAGGGC CCGGTCGTCT ACGTGCCGGA CGCGTCGCGC
TCGGTATCGG TCGCCTCGAA CCTGCTGTCC GACGAAGGCG CGACGAAATA CCTCGACGAG
CTGAAAGCCG ACTACGAGCG CATCCGCGCG CAGCACGCGA ACAAGAAGGC GCTGCCGCTC
GTCACGCTCG CCGAAGCGCG CGCGAACAAG ACGAAGATCG ACTGGGCGCG CTACACGAGC
GTCAAGCCGA AGTTCATCGG CCGGCGCATG TTCAAGAACT ACGATCTGAA CGAGCTCGCG
AACTACATCG ACTGGGGCCC GTTCTTCCAG ACCTGGGACC TCGCGGGCCC GTACCCGGCG
ATCCTGAACG ACGAGATCGT CGGCGAATCG GCGCGCCGCG TATTCTCCGA CGCGAAATCG
ATGCTCGCGC GCCTCATCCA GGGCCGCTGG CTCACCGCGA ACGGCGTGAT CGCGCTGTTG
CCGGCGAACA CGGTGGGCGA CGACGACATC GAGATCTACA CCGACGACAC GCGCGCCGAA
GTGCTGCTCA CGTGGCACAA CCTGCGCCAG CAGAGCGTGC GCCCGGTGGT GGACGGCGTG
ATGCGGCCGA ACCGCTCGCT CGCCGATTTC ATCGCGCCGA AGGATTCGGG CGTCGCCGAC
TACATCGGGA TGTTCGCGGT GACGGCCGGC ATCGGCGTCG ACGCGAAGGA AAAACAGTTC
CTCGCCGATC ACGACGACTA CAGCGCGATC ATGCTCAAGG CGCTCGCCGA CCGGCTCGCG
GAGGCGTTCG CCGAGGCGAT GCACGCGCGT GTGCGCCGCG AGCTGTGGGG CTACGCGGCG
ACCGAGCAGC TCGACAACGA CGCGCTGATC GCCGAGCAGT ACGCGGGCAT CCGCCCGGCG
CCCGGTTACC CGGCGTGCCC GGACCACCTC GTGAAGCGCG CAATGTTCGA AGCGCTTCAT
ACAGACGAGA TCGGGATGAG CGTCACCGAT TCGCTCGCGA TGCTGCCGGC CGCGAGCGTC
TCCGGCTTCT ATCTCGCGCA TCCGGACAGC ACGTACTTCT CGGTCGGCAA GATCGGCCAG
GATCAGCTCG AGGATTTCGC GCGCCGCACG GCGCTGTCGA AGGCGGACGC CGAGCGCGCG
CTCGCGCCGC TGCTCTGA
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| Protein sequence | MTDHTMRLAG LEPFNVTSGT LFINVGERTN VTGSKAFARM ILNGQFDEAL AVARQQVENG
AQVIDVNMDE AMLDSKAAMV RFLNLIASEP DIARVPIMID SSKWDVIEAG LKCVQGKAIV
NSISLKEGKE AFVHHAKLIR RYGAAAVVMA FDEAGQADTL ARKTEICKRS YDVLVNEVGF
APEDIVFDPN IFAVATGIDE HNNYAVDFIE ATRWIKRNLP YAKVSGGVSN VSFSFRGNDP
VREAIHTVFL YHAIQAGMDM GIVNAGQLGV YAELDAELRE RVEDVILNRR DDSTDRLLEI
ADKFKTGAAK KEENLEWRSQ PVEKRLAHAL VHGITNFIVE DTEEARAKIA AAGGRPINVI
EGPLMDGMNI VGDLFGQGKM FLPQVVKSAR VMKQAVAHLI PFIEEEKRLL AQAGGDVRAK
GKIVIATVKG DVHDIGKNIV SVVLQCNNFE VVNMGVMVPC NEILAKAKVE GADIVGLSGL
ITPSLEEMAY VASEMQRDDY FRVKKIPLLI GGATTSRVHT AVKIAPHYEG PVVYVPDASR
SVSVASNLLS DEGATKYLDE LKADYERIRA QHANKKALPL VTLAEARANK TKIDWARYTS
VKPKFIGRRM FKNYDLNELA NYIDWGPFFQ TWDLAGPYPA ILNDEIVGES ARRVFSDAKS
MLARLIQGRW LTANGVIALL PANTVGDDDI EIYTDDTRAE VLLTWHNLRQ QSVRPVVDGV
MRPNRSLADF IAPKDSGVAD YIGMFAVTAG IGVDAKEKQF LADHDDYSAI MLKALADRLA
EAFAEAMHAR VRRELWGYAA TEQLDNDALI AEQYAGIRPA PGYPACPDHL VKRAMFEALH
TDEIGMSVTD SLAMLPAASV SGFYLAHPDS TYFSVGKIGQ DQLEDFARRT ALSKADAERA
LAPLL
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