| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BURPS1710b_0556 |
|---|
| Symbol | |
|---|
| ID | 3688192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia pseudomallei 1710b |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007434 |
|---|
| Strand | - |
|---|
| Start bp | 556958 |
|---|
| End bp | 559687 |
|---|
| Gene Length | 2730 bp |
|---|
| Protein Length | 909 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637727012 |
|---|
| Product | kelch repeat-containing protein |
|---|
| Protein accession | YP_331970 |
|---|
| Protein GI | 76809253 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.267215 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGC GCGAAGAAAA GTCGCTGTCG GTCAGCCACT CGCGTCGAGC ATTTCTCGTT
TGGGTTCCGG CCTCGCTGTT GGTGACGGCT TGCGGCGGAG ACAACGGCAG CTCCGCTCCG
GCGTCCATCA AGAAAGCCGT CGCCGCGCTG ACGGGCCCTG GCGGAGCGAC GTGGACCGGG
ATGGGCAAGG GCGGGATTCT CATCCAGTCG CCCTACTCGG GCGCCGGCAA TTTCGAGCTT
CTCGCCGGCG ATGAATATGG CATGTTGCAC TGCCTGCGAC GCACGAACGA CAACGGCGCC
CAATGGATGG TCGCCGTCGG CGACGGGATG GGATCGAAGA ACAGCGTCTC CGGTTATTGC
CACACGTACA GCACGAACTA CACGAACATC GAAGCCGCGG TCGTCGATGA CGGCGCGGTC
AAAACATACT TCCGGAGCAA TAGCACGCCG TGGTCGGCTC ACAAGACGAT ACCGATCGGC
GACGCGCAAG GCTTCCCCGC CTATCTCCAA TCGAATCGCA ACGGCGCGCA GCAGCTCGAA
CTGGTGGTGG GCATGCGCCG CGGCGGCATG GTCCATTATT GGAGAGACGA CAAGGACGGC
TTCACGTGGA AGCAATCGAG CATCTTCGGC AGCGGCCAGG TGAAGGGCGT GTCCGTCATG
CAAGGCAACT ACATCGGGCC CGACAACAAC GCCAATCTCG AACTGGTCGC ATGGGTGGAC
GATCGTCTGG AGTCCTGGTG TTGCGAGGGG CGCGCGTGGA GAAAAATCTG CAACATCGCC
GCCGGAGGCG TCGGGGGCGC GCCCGCACTG CTTCAGAGCA ATTACGGAAC CAAAGGGAAT
TTCGAGGTTC TCGTGCCGCT CGCCACGGGC GGCATCGCTC ACTACTGGCG CAACAACGAT
GCCGAAGGCA TCCCTTGGAG CTTCACCGGC ACGATCGGCA CGGGCGCCTA TGTCGCCGCC
GGCCTGCTCC AGTCGCAGAA CGGCGTCAAA GGAGACTTCG AGGCGATCGG GCTGCGCGCC
TCCGGCAAGG CCGATGTTTT CAGGCGCGGC GATACGCTCG TCTGGGAAAA CAGCGCGACC
GTCTCGCCGT TCTCCGAGGG CACGGCGGCC GACGTCGGCG TTTCGTCTCA CATCGTCGAC
GTCAACGTCA CCGGCATCAA TTCCGTGCTC CTGAAGAACG GCAGCGTGCT GATGTTCGGC
TACTACAAGG GCGGCTCCAC GAACAAGACC ATTCCGGCAT GCATCTGGAA TCCGGTCAAC
GACCAGATCA CCGCCATCCC GTCCTTCCGA AACAATTTCT GCGCGGGACA AACCGCCATG
CCCGACGGAA AAGTGCTGAT CGTCGGCGGC CACATCGGCG ATACGTTGAA GGACGTCGTG
GTTTTCGATC CCGACAACCA CACCGCCACG CTCGTCGCCA CGATGACGAA GGGGCGCTGG
TACCCATCGA CCGCCACGTT GCCCGACGGG CAGGTGTTCA TCATCAGCGG AACGGAAACG
GCGGGCTGGA ACACCTCGGT CAACGACACC TGGCAGACGT ATGCGAACAA CGCGCTGACA
GCGCCGGAAG ACGTGATCTC GCCCTTCTCG CCCTATTACC CGAAATCGCA AACGCAGATC
GACCTGTACC CGTTTCTCTT CGTTCTGCCG GACGGCAAAC TGCTCGTTCA CGCGAGAAAC
ACGACGCGCT TTTTCGACAT CGGAACCCGA TCGTGGAGCG CGACGCTTTA CAAGACCGTT
TCCGACAACA GCCGCACCTA TCCATTCATG GGCGGGACGG CCGTGCTCCC GTTGAGGCCT
TCGGAGAACT ACAGAGTCAA GGTCGTCGTC GCCGGCGGCG CGGACAAGTC GGCTCAGATC
GCCATCGGCG ACGATAGCCA GTACGACAAC AGCGTGCCCG GCATGACGAG CTGCGAGATG
CTCGATCTCG GAGACGCCGC GCCCGCGTGG AAAGCCATCG CGCCCCTCAA TGAAGGGCGG
GTCATGTGCG ACCTCGTCAC GCTGCCGGAC GGCAAGCTGT TCATCGTCGG CGGCAACAAA
ACGGGCAAGG CCGACTACGG GCGCGGGCCG ACCTATCGGC CCGAGCTCTA TGATCCGCAG
ACGAACACGT GGACGTTGCT CGCGTCCACG CGCATCGCCC GGGGCTATCA CGCCACCGCG
CTGCTGCTGC CCGACGGCCG GATCGCCATC ACGGGCAAGG ACGGCGACTA TCAAGGCTCG
GGGCTTCAGT ATGCCGAGAC GCGCGTCGAG ATCTTTTCGC CGCCCTATCT CTTCAAGGGG
CCGCGGCCGG CGATCCAGTC GGCCCCCGCT TCGATCAACC ACGGCGGCAG CTTTACCCTC
GGCCTGTCGA GCGGCACCAG TCCGGAGGAC ATCGGCTCGA TCGTGATCGT CGCGTGCGGC
TCCGCCACGC ATCAGATCAA TTTCTCGCAT CGAATCGTGG AGCTCGTTTT CGCCGTATCG
GGCGGCACGC TGACCGTGAA CGCGCCGCCG AACGCGAATA TCGCGCCGCC CGGCTATTAC
ATGATGTTCG TGTTGAGCAA GCTCGGCGTC CCCAGTGTGT CGTCGATCGT GCACGTCGCC
GCCGGTTCGG CGCAAGCGGC CTCCGCCACG CCCGAGGCAC TGACCCGGCA ACCGCGCGTC
GCGACCGTCT CGATCGAACA GGCCGGTGAC GCGCCCCGGT GCGCGCCGCT GACCGTCGCG
GAAAAGCAGT CGATCAACGG CATGGGCTGA
|
|---|
| Protein sequence | MKKREEKSLS VSHSRRAFLV WVPASLLVTA CGGDNGSSAP ASIKKAVAAL TGPGGATWTG
MGKGGILIQS PYSGAGNFEL LAGDEYGMLH CLRRTNDNGA QWMVAVGDGM GSKNSVSGYC
HTYSTNYTNI EAAVVDDGAV KTYFRSNSTP WSAHKTIPIG DAQGFPAYLQ SNRNGAQQLE
LVVGMRRGGM VHYWRDDKDG FTWKQSSIFG SGQVKGVSVM QGNYIGPDNN ANLELVAWVD
DRLESWCCEG RAWRKICNIA AGGVGGAPAL LQSNYGTKGN FEVLVPLATG GIAHYWRNND
AEGIPWSFTG TIGTGAYVAA GLLQSQNGVK GDFEAIGLRA SGKADVFRRG DTLVWENSAT
VSPFSEGTAA DVGVSSHIVD VNVTGINSVL LKNGSVLMFG YYKGGSTNKT IPACIWNPVN
DQITAIPSFR NNFCAGQTAM PDGKVLIVGG HIGDTLKDVV VFDPDNHTAT LVATMTKGRW
YPSTATLPDG QVFIISGTET AGWNTSVNDT WQTYANNALT APEDVISPFS PYYPKSQTQI
DLYPFLFVLP DGKLLVHARN TTRFFDIGTR SWSATLYKTV SDNSRTYPFM GGTAVLPLRP
SENYRVKVVV AGGADKSAQI AIGDDSQYDN SVPGMTSCEM LDLGDAAPAW KAIAPLNEGR
VMCDLVTLPD GKLFIVGGNK TGKADYGRGP TYRPELYDPQ TNTWTLLAST RIARGYHATA
LLLPDGRIAI TGKDGDYQGS GLQYAETRVE IFSPPYLFKG PRPAIQSAPA SINHGGSFTL
GLSSGTSPED IGSIVIVACG SATHQINFSH RIVELVFAVS GGTLTVNAPP NANIAPPGYY
MMFVLSKLGV PSVSSIVHVA AGSAQAASAT PEALTRQPRV ATVSIEQAGD APRCAPLTVA
EKQSINGMG
|
|---|
| |